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MPF_scaffold_55_1

Organism: MPF_Firmicutes_41_269

near complete RP 49 / 55 BSCG 51 / 51 ASCG 15 / 38
Location: 294..1064

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;" UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 256.0
  • Bit_score: 444
  • Evalue 9.20e-122
FliA/WhiG subfamily RNA polymerase sigma-28 subunit KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 256.0
  • Bit_score: 438
  • Evalue 1.00e-120
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 438
  • Evalue 1.50e-120

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Taxonomy

Clostridiaceae bacterium BRH_c20a → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 771
ATGGCCAACAAGGTTGAGCTCTGCGGCGTAGATACTTCAAAGCTGCCGGTACTTACCAACGAAGAAATGAGAGAACTTTTTAAACAGATTAAAGAAGGTAATGAAGAGGCTCGGCAAAAGCTGGTACAGGGAAACCTCCGGTTGGTTTTAAGTGTTATACAGCGTTTTACCAATAGAGGGGAATATGTAGATGATCTTTTCCAGGTGGGCTGTATTGGCCTTATGAAAGCAGTAGATAATTTTGATCTTTCCCAGAATGTTAAATTTTCCACTTATGCTGTTCCCATGATTATAGGTGAGATACGAAGGTACCTTCGGGATAACAACTCCATAAGGGTAAGCCGCTCTTTACGGGATATGGCATACAAAGCTCTGCAGATAAGAGATTCCCTGGTTAATAAATATTCCCGGGAACCCACCATTACAGAGATTGCCCGGGAGCTGAAAATACCCAGAGAAGAAGTTATTTTTGCTCTGGACGCAATTCAGGAGCCCGTATCCCTTTTTGAACCCATTTATCACGACGGCGGTGACCCCATATTTGTTATGGATCAAATTGGAGACGAAAAAAATTCCGATACAAACTGGCTGGAAAATATTGCTGTAAAAGAGGCGCTTAATAAGCTGAGCGAGCGGGAAAAGCTTATATTGACAATGCGTTTTTTTGAGGGAAAAACTCAGATGGAGGTGGCTGAAGAAATAGGTATTTCCCAGGCTCAGGTTTCAAGGCTTGAGAAAGCTGCCTTAAATCATATGAGAAGATATATGTGA
PROTEIN sequence
Length: 257
MANKVELCGVDTSKLPVLTNEEMRELFKQIKEGNEEARQKLVQGNLRLVLSVIQRFTNRGEYVDDLFQVGCIGLMKAVDNFDLSQNVKFSTYAVPMIIGEIRRYLRDNNSIRVSRSLRDMAYKALQIRDSLVNKYSREPTITEIARELKIPREEVIFALDAIQEPVSLFEPIYHDGGDPIFVMDQIGDEKNSDTNWLENIAVKEALNKLSEREKLILTMRFFEGKTQMEVAEEIGISQAQVSRLEKAALNHMRRYM*