ggKbase home page

MPF_scaffold_180_5

Organism: MPF_Clostridia_54_36_partial

partial RP 3 / 55 BSCG 5 / 51 ASCG 1 / 38
Location: 3318..4085

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source= UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 254.0
  • Bit_score: 429
  • Evalue 3.00e-117
sigma 28 (flagella/sporulation) KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 254.0
  • Bit_score: 426
  • Evalue 6.80e-117
  • rbh
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 426
  • Evalue 4.40e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Moorella glycerini → Moorella → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 768
TTGCGCCTTTCGGAGATGAACTTACCTCGCTTTCCCCTGTTGTCAGAAGAAGAAACCCAGGAACTCCTGGAACGGGCCAAGGCCGGCGACAAGGTGGCCCGGGAACGGCTGATCAACTGCAACCTGAAGCTGGTCTTTAACATCGTACAGCGTTTCGAAAACAGGGGATACGAATTGGAGGATCTATTTCAAATCGGTACCATCGGGCTAATTAAGGCCATTGACAAATTCGATCTCAGTTATAAGGTCAAGTTTTCTACCTATGCGGTGCCCATGATCCTGGGAGAGATAAAAAGGTTTCTAAGGGACGACAGTTCGGTGAAGGTGAGCCGGTCCCTAAAGGAGACGGCCTTCAAGGTCAACCGCACCCGGGATGAACTCGCTAAGAAGCTGGGGAGGGAGCCGGGAATAAACGAAATCGCCCAGGCTCTGAATCTTTCCCGAGAAGAAATCGTAGCCGCCCTGGAGGCCATCCAGTCCCCGGGCTCCATCCATGACACGGTTTACCAGGACGACGGTGACCCTATTTACGTTTTAGACCAGCTCACCGATGAGGACGAACAGGAACCGGTGTGGTTGGATAAAATAGCCCTCAAGGAAGTTTTGATGAAGCTGCCCGAAAAGCACCGCAAGGTGATTGTCATGCGTTTTTTTCAGGACAAAACCCAGACCGAGGTGGCCGAGAGGTTGGGTTTATCCCAGGTGCAGATCTCCCGTATCGAGCGCCAAGCCCTAGCGCGGCTCCGGGAGTTCCTGCGCTCGCCTTGA
PROTEIN sequence
Length: 256
LRLSEMNLPRFPLLSEEETQELLERAKAGDKVARERLINCNLKLVFNIVQRFENRGYELEDLFQIGTIGLIKAIDKFDLSYKVKFSTYAVPMILGEIKRFLRDDSSVKVSRSLKETAFKVNRTRDELAKKLGREPGINEIAQALNLSREEIVAALEAIQSPGSIHDTVYQDDGDPIYVLDQLTDEDEQEPVWLDKIALKEVLMKLPEKHRKVIVMRFFQDKTQTEVAERLGLSQVQISRIERQALARLREFLRSP*