ggKbase home page

MPI_scaffold_2368_6

Organism: MPI_Synergistetes_53_16

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 13 / 38 MC: 2
Location: comp(5309..6862)

Top 3 Functional Annotations

Value Algorithm Source
choline/carnitine/betaine transporter KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 496.0
  • Bit_score: 852
  • Evalue 4.50e-245
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:AER67182.1}; Flags: Precursor;; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 496.0
  • Bit_score: 852
  • Evalue 2.30e-244
Choline/carnitine/betaine transporter similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 852
  • Evalue 6.60e-245

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermovirga lienii → Thermovirga → Synergistales → Synergistia → Synergistetes → Bacteria

Sequences

DNA sequence
Length: 1554
ATGCGGATCGACGTAAGCGCCGCAACGGCGCTTTTCCAGAGACGGAGGGAGGCGTGCGCCTTGGAGAAAAAAAGCGGTTTCAACGAAGTATTCGTTATTTCCATGGGAGTAACTTTTGCGGTGGTTCTTTGGGGATTTTTGATGCCTGTGGGTTTCGGAAACTTCGCGACCAGTCTTTTTAATTTCCTGGTAAACAATTTTGGCTGGGGCTATATGCTAGCAATGAACATTTTCGTGGTGTTTCCGATTTTTCTGGCTCTAAGCAAATATAGAAACATCAAGCTGGGTCCGCCGGATTCGAAACCGGAATTTTCCAATTTTTCGTGGTTTGCCATGCTGTTTTCGGCGGGTATGGGCGTAGGTTTGGTCTTTTATGGTGTCGGGGAACCTGTCTTTCATTTCCTCAGCCCTCCTACGGCTGAACCAGGGACAGCCGCCGCGGCTGCGGAGGCTATGAGAAAATCCTTTTTTCACTGGGGAATTCACCCGTGGGCCAGCTACGCGATAATAGCGATGCCCCTGGCCTACTTCCAGTTCCGGAAGGGCTACCCGGGTCTTATCAGCAGCCTCTTTATTCCTTTGGTAGGTGAAGAAGGTGTAAAGGGAGGCTTCGGCAAGGCGGTCGACATTCTTGCTATTTTTGCCACCGTGGCAGGGATAGCCACGTCGCTGGGTCTTGGAGTACTTCAGATCAACAGCGGCCTGAACTATCTTTTCGGGATAAGCTCGACAGTAACTGCACAACTTATGATAATCATCGTGCTCGCATTGATATACACAGGGTCGGCTGTGGCCGGAATCGAAAAGGGTATCAAGCGTGTTGCCGACTCAAACCTCTATATAGCACTGACGCTCCTCGGACTCCTTTTCTTGATTGGACCCACGATCAGCATCCTGGAGACATGGTTGTCAACTTTTGGAGACTATCTAAGCAGTCTTGTAAGGGACAGTTTCATGCTCGCCCCGAATGATGAAAAGTACAAGTCTTGGCTCAATGGCTGGACCATTTTCTACTGGGCGTGGTGGATTGCCTGGGCTCCATTTGTAGGATCTTTTATCGCGAGGATTTCCAAGGGGAGGACGATAAGGGAATTCGTACTGGGTGTTCTGATCGTCCCCGCTCTTGGAAGCTTCACCTGGTTCGCAGTTTTCGGGACATCGGCGCTTCATATAGAACTATCGGGGATAGGAGATCTTGCGACAAAGGTCGCAGCCGATATATCTACCGGAGTTTTCGAGATGTACAGTTACTACATGCTTGGCGGAATAATGTCGGTCATCATGGTGGTACTCATCTCCACCTTTTTCATTACTTCTGCTAACTCCGCCACTTTTGTCCTTTCCATGTACTCCACGAGGGGTGACCTGAATCCGCCTAAAGGGAAGATGGCCATATGGGGTTTTCTCCAGGCTGCCCTTGCCTTCGTTCTCCTCATGACCGGGGGGCTCCAGAATTTGCAAATCGTTTCCATAGCGGCGGCGGCGCCTTTTACGATAGTGATGGTTCTGGCGTGCTGGTCTATGATGAAGGGCCTGGGACAGGAACACAGCTAG
PROTEIN sequence
Length: 518
MRIDVSAATALFQRRREACALEKKSGFNEVFVISMGVTFAVVLWGFLMPVGFGNFATSLFNFLVNNFGWGYMLAMNIFVVFPIFLALSKYRNIKLGPPDSKPEFSNFSWFAMLFSAGMGVGLVFYGVGEPVFHFLSPPTAEPGTAAAAAEAMRKSFFHWGIHPWASYAIIAMPLAYFQFRKGYPGLISSLFIPLVGEEGVKGGFGKAVDILAIFATVAGIATSLGLGVLQINSGLNYLFGISSTVTAQLMIIIVLALIYTGSAVAGIEKGIKRVADSNLYIALTLLGLLFLIGPTISILETWLSTFGDYLSSLVRDSFMLAPNDEKYKSWLNGWTIFYWAWWIAWAPFVGSFIARISKGRTIREFVLGVLIVPALGSFTWFAVFGTSALHIELSGIGDLATKVAADISTGVFEMYSYYMLGGIMSVIMVVLISTFFITSANSATFVLSMYSTRGDLNPPKGKMAIWGFLQAALAFVLLMTGGLQNLQIVSIAAAAPFTIVMVLACWSMMKGLGQEHS*