ggKbase home page

MPI_scaffold_14

Alias: MPI_Clostridia_34_121_1

Search features with annotation key words

Displaying items 31-60 of 61 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_14_31
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(30726..32216)
DNA (1491bp) protein (497aa)
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
hypothetical protein
Uncharacterized protein
MPI_scaffold_14_32

Not on your lists

comp(32904..33404)
DNA (501bp) protein (167aa)
Marine sediment metagenome DNA, contig: S01H4_C01487 {ECO:0000313|EMBL:GAG69781.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ferripyochelin binding protein (fbp)
UPI000287EB69 related cluster
MPI_scaffold_14_33
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(33401..34900)
DNA (1500bp) protein (500aa)
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=RBG_19FT_COMBO_JS1_35_14_curated
uvrC; excinuclease ABC subunit C
excinuclease ABC, C subunit; K03703 excinuclease ABC subunit C alias=ACD63_C00009G00024,ACD63_29683.30027.9G0024,ACD63_29683.30027.9_24 id=95826 tax=ACD63 species=Thermanaerovibrio acidaminovorans genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes organism_group=OD1, not OD1-i organism_desc=OD1
MPI_scaffold_14_34
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(35160..37982)
DNA (2823bp) protein (941aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RBG_19FT_COMBO_JS1_35_14_curated
excinuclease ABC subunit A
UvrABC system protein A
MPI_scaffold_14_35
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(38142..40142)
DNA (2001bp) protein (667aa)
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RBG_19FT_COMBO_JS1_35_14_curated
excinuclease ABC subunit B
UvrABC system protein B
MPI_scaffold_14_36
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40429..41763)
DNA (1335bp) protein (445aa)
hypothetical protein
Predicted inactivated Zn-dependent peptidase, PMBA ortholog {ECO:0000313|EMBL:AAK79794.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
Inactivated Zn-dependent peptidase
MPI_scaffold_14_37
Petrotoga mobilis, Petrotoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(41760..43163)
DNA (1404bp) protein (468aa)
peptidase U62 modulator of DNA gyrase
Peptidase U62 modulator of DNA gyrase {ECO:0000313|EMBL:ABX31882.1}; TaxID=403833 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Petrotoga.;" source="Petrotoga mobilis (strain DSM 10674
Peptidase U62 modulator of DNA gyrase
MPI_scaffold_14_38
unknown

Not on your lists

comp(43150..44481)
DNA (1332bp) protein (444aa)
MPI_scaffold_14_39
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44494..45234)
DNA (741bp) protein (247aa)
ABC transporter related protein {ECO:0000313|EMBL:EGD46931.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyro
ABC transporter
ABC transporter related protein
MPI_scaffold_14_40
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45302..46597)
DNA (1296bp) protein (432aa)
Putative antilisterial bacteriocin subtilosin biosynthesis protein AlbA {ECO:0000313|EMBL:EDM87097.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;
radical SAM domain-containing protein
Putative antilisterial bacteriocin subtilosin biosynthesis protein AlbA
MPI_scaffold_14_41
unknown

Not on your lists

comp(46661..46783)
DNA (123bp) protein (41aa)
MPI_scaffold_14_42
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46954..47748)
DNA (795bp) protein (265aa)
Transcriptional regulator {ECO:0000313|EMBL:KHO60910.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoa
transcriptional activator of acetoin/glycerol metabolism
Transcriptional activator of acetoin/glycerol metabolism
MPI_scaffold_14_43

Not on your lists

comp(47955..49667)
DNA (1713bp) protein (571aa)
Adenine deaminase (EC:3.5.4.2)
Marine sediment metagenome DNA, contig: S01H4_C00123 {ECO:0000313|EMBL:GAG65120.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Archaeal Adenine deaminase (Fragment)
MPI_scaffold_14_44

Not on your lists

comp(50175..50786)
DNA (612bp) protein (204aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Marine sediment metagenome DNA, contig: S12H4_L01323 {ECO:0000313|EMBL:GAI86524.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Dephospho-CoA kinase
MPI_scaffold_14_45
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(50884..53547)
DNA (2664bp) protein (888aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RBG_19FT_COMBO_JS1_35_14_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase
MPI_scaffold_14_46

Not on your lists

comp(54199..54426)
DNA (228bp) protein (76aa)
Marine sediment metagenome DNA, contig: S01H4_C02444 {ECO:0000313|EMBL:GAG61906.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Uncharacterized protein
MPI_scaffold_14_47
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(54464..58084)
DNA (3621bp) protein (1207aa)
DNA polymerase III catalytic subunit, DnaE type; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RBG_13_Actinobacteria_35_12_curated
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA polymerase III catalytic subunit, DnaE type
MPI_scaffold_14_48

Not on your lists

comp(58222..59262)
DNA (1041bp) protein (347aa)
putative 6-phosphofructokinase (EC:2.7.1.-)
Marine sediment metagenome DNA, contig: S06H3_C01127 {ECO:0000313|EMBL:GAH92301.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
6-phosphofructokinase
MPI_scaffold_14_49
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(59262..60146)
DNA (885bp) protein (295aa)
fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.40); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=RBG_13_Actinobacteria_35_12_curated
fba; fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II
MPI_scaffold_14_50

Not on your lists

60950..61969
DNA (1020bp) protein (340aa)
Marine sediment metagenome DNA, contig: S01H1_C00281 {ECO:0000313|EMBL:GAF74866.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
HflK protein
HflK protein
MPI_scaffold_14_51

Not on your lists

61969..62820
DNA (852bp) protein (284aa)
Marine sediment metagenome DNA, contig: S12H4_L01796 {ECO:0000313|EMBL:GAI76096.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hflC; membrane protease subunit HflC rbh
Membrane protease subunit HflC
MPI_scaffold_14_52
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(63262..64911)
DNA (1650bp) protein (550aa)
putative dehydrogenase Tax=RBG_19FT_COMBO_JS1_35_14_curated
putative dehydrogenase
Putative dehydrogenase
MPI_scaffold_14_53

Not on your lists

comp(64904..65398)
DNA (495bp) protein (165aa)
Marine sediment metagenome DNA, contig: S01H4_C01326 {ECO:0000313|EMBL:GAG66828.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Rossmann fold nucleotide-binding protein
Rossmann fold nucleotide-binding protein
MPI_scaffold_14_54

Not on your lists

comp(65482..65793)
DNA (312bp) protein (104aa)
Marine sediment metagenome DNA, contig: S06H3_S14895 {ECO:0000313|EMBL:GAI44565.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Uncharacterized protein
MPI_scaffold_14_55

Not on your lists

comp(65793..66071)
DNA (279bp) protein (93aa)
Marine sediment metagenome DNA, contig: S03H2_C02005 {ECO:0000313|EMBL:GAH23141.1}; Marine sediment metagenome DNA, contig: S06H3_L03911 {ECO:0000313|EMBL:GAI03015.1}; TaxID=412755 species="unclassifi
hypothetical protein
Uncharacterized protein
MPI_scaffold_14_56
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

66415..67143
DNA (729bp) protein (243aa)
hypothetical protein Tax=RBG_13_Actinobacteria_35_12_curated
hypothetical protein
Uncharacterized protein
MPI_scaffold_14_57
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(67266..68717)
DNA (1452bp) protein (484aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RBG_19FT_COMBO_JS1_35_14_cura
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
MPI_scaffold_14_58
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(68714..70204)
DNA (1491bp) protein (497aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RBG_19FT_COMBO_JS1_35_14_curated
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A
MPI_scaffold_14_59

Not on your lists

comp(70576..70869)
DNA (294bp) protein (98aa)
Marine sediment metagenome DNA, contig: S01H1_C01271 {ECO:0000313|EMBL:GAF69502.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
glutamyl-tRNA(Gln) amidotransferase subunit C
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
MPI_scaffold_14_60
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(71135..73240)
DNA (2106bp) protein (702aa)
Lig; NAD-dependent DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=RBG_19FT_COMBO_JS1_35_14_curated
DNA ligase (EC:6.5.1.2)
DNA ligase
Displaying items 31-60 of 61 in total

View Taxonomy