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MPI_scaffold_185_12

Organism: MPI_Methanocalculus_52_23_partial

near complete RP 32 / 55 MC: 4 BSCG 16 / 51 MC: 1 ASCG 32 / 38 MC: 2
Location: 7211..7561

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, subunit F {ECO:0000313|EMBL:EHQ35764.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EHQ35764.1};; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Meth UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 116.0
  • Bit_score: 168
  • Evalue 5.70e-39
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6) KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 112.0
  • Bit_score: 166
  • Evalue 4.40e-39
DNA-directed RNA polymerase, subunit F similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 167
  • Evalue 1.70e-39

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Taxonomy

Methanoplanus limicola → Methanoplanus → Methanomicrobiales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 351
ATGAAAGTTAAGGCATTTGTTAGCGAAGAAAGGGTTACCCTTCCAGAGATCCGGGAGGATCTCCTCAGGATCGAGGCTGCCCGCCTCGAAGCCGGGAAGGAGTTGTCTTACGAGCTGAGGAAGAGCATCGAACATGTCAACCACCTCTCAAAGCTCTCTCCTGAAGCATCAAGAGAACTTCTTGATGAACTGCTTGCGCTTGAGAAGATGAAACCGGAGATCGCATACCGGATCGTGAACCTGATGCCACGGAACAGGGATGAACTTCGTGCAATCTATGCAAAAGAACGCTTTACCCTGACTCCTGAAGAACTGGATGCGATCCTCGATCTGGTTTCAGCTCGTGTATAG
PROTEIN sequence
Length: 117
MKVKAFVSEERVTLPEIREDLLRIEAARLEAGKELSYELRKSIEHVNHLSKLSPEASRELLDELLALEKMKPEIAYRIVNLMPRNRDELRAIYAKERFTLTPEELDAILDLVSARV*