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MPI_Clostridiales_38_11

mpi_Clostridiales_38_12
In projects: mpi

Consensus taxonomy: Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Metagenomic Context

Parent: MPI_UNK

Properties

Avg. coverage: 12.42 Longest contig: 44.11 Kbp Bin length: 1.88 Mbp GC content: 38.40 %
Contigs count: 156 Features count: 1866 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Displaying items 1-50 of 156 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
MPI_scaffold_93 MPI_Clostridiales_38_10_1
Order: Clostridiales (65.96%)
47 44111 bp 39.11 12.06 92.05
MPI_scaffold_70 MPI_Clostridiales_38_10_2
Order: Clostridiales (80.43%)
46 41955 bp 36.80 12.96 94.29
MPI_scaffold_86 MPI_Clostridiales_38_10_4
Order: Clostridiales (86.67%)
45 39525 bp 36.66 13.44 96.90
MPI_scaffold_74 MPI_Clostridiales_38_10_3
Order: Clostridiales (81.82%)
44 41278 bp 38.84 13.30 92.16
MPI_scaffold_80 MPI_Clostridiales_38_10_92
Order: Clostridiales (82.5%)
40 40410 bp 38.06 13.44 95.61
MPI_scaffold_67 MPI_Clostridiales_38_10_89
Order: Clostridiales (53.85%)
39 42388 bp 38.43 13.26 90.05
MPI_scaffold_72 MPI_Clostridiales_38_10_90
Order: Clostridiales (82.05%)
39 41697 bp 38.00 12.57 92.32
MPI_scaffold_138 MPI_Clostridiales_38_10_91
Order: Clostridiales (56.41%)
39 41267 bp 38.79 11.18 89.16
MPI_scaffold_144 MPI_Clostridiales_38_10_9
Order: Clostridiales (71.43%)
35 33154 bp 37.85 13.26 92.38
MPI_scaffold_115 MPI_Clostridiales_38_10_5
Order: Clostridiales (90.91%)
33 35861 bp 38.31 13.16 90.90
MPI_scaffold_118 MPI_Clostridiales_38_10_6
Order: Clostridiales (84.85%)
33 35173 bp 37.47 12.62 93.45
MPI_scaffold_125 MPI_Clostridiales_38_10_7
Order: Clostridiales (87.5%)
32 34738 bp 38.05 12.70 95.51
MPI_scaffold_669 MPI_Clostridiales_38_10_26
Order: Clostridiales (96.88%)
32 15679 bp 37.78 12.92 92.53
MPI_scaffold_173 MPI_Clostridiales_38_10_94
Order: Clostridiales (51.61%)
31 31011 bp 39.21 12.93 90.74
MPI_scaffold_250 MPI_Clostridiales_38_10_97
Order: Clostridiales (93.33%)
30 27619 bp 39.20 12.56 96.29
MPI_scaffold_126 MPI_Clostridiales_38_10_8
Order: Clostridiales (86.67%)
30 34731 bp 38.27 12.91 95.15
MPI_scaffold_305 MPI_Clostridiales_38_10_12
Order: Clostridiales (68.97%)
29 24870 bp 38.03 12.48 88.87
MPI_scaffold_882 MPI_Clostridiales_38_10_98
Order: Clostridiales (66.67%)
27 24279 bp 37.40 13.01 84.06
MPI_scaffold_177 MPI_Clostridiales_38_10_95
Order: Clostridiales (85.19%)
27 30573 bp 37.62 12.93 94.47
MPI_scaffold_145 MPI_Clostridiales_38_10_93
Order: Clostridiales (84%)
25 33101 bp 41.82 12.84 88.52
MPI_scaffold_158 MPI_Clostridiales_38_10_10
Order: Clostridiales (88%)
25 31984 bp 37.96 12.65 93.15
MPI_scaffold_432 MPI_Clostridiales_38_10_19
Order: Clostridiales (91.67%)
24 20620 bp 37.71 12.51 94.47
MPI_scaffold_289 MPI_Clostridiales_38_10_11
Order: Clostridiales (91.3%)
23 25390 bp 37.17 13.62 93.88
MPI_scaffold_321 MPI_Clostridiales_38_10_14
Order: Clostridiales (73.91%)
23 24431 bp 38.30 12.32 94.77
MPI_scaffold_523 MPI_Clostridiales_38_10_21
Order: Clostridiales (63.64%)
22 18464 bp 40.03 12.61 89.23
MPI_scaffold_560 MPI_Clostridiales_38_10_23
Order: Clostridiales (81.82%)
22 17697 bp 38.75 13.24 92.42
MPI_scaffold_312 MPI_Clostridiales_38_10_13
Order: Clostridiales (81.82%)
22 24620 bp 39.91 13.04 91.89
MPI_scaffold_348 MPI_Clostridiales_38_10_15
Order: Clostridiales (59.09%)
22 23665 bp 35.56 12.56 91.05
MPI_scaffold_383 MPI_Clostridiales_38_10_17
Order: Clostridiales (86.36%)
22 22225 bp 40.99 12.44 95.64
MPI_scaffold_386 MPI_Clostridiales_38_10_99
Order: Clostridiales (71.43%)
21 22108 bp 37.05 22.89 87.46
MPI_scaffold_374 MPI_Clostridiales_38_10_16
Order: Clostridiales (60%)
20 22692 bp 37.53 12.59 92.16
MPI_scaffold_482 MPI_Clostridiales_38_10_102
Order: Clostridiales (100%)
19 19343 bp 40.26 12.08 92.82
MPI_scaffold_476 MPI_Clostridiales_38_10_101
Order: Clostridiales (83.33%)
18 19503 bp 38.30 13.09 96.25
MPI_scaffold_402 MPI_Clostridiales_38_10_100
Order: Clostridiales (82.35%)
17 21459 bp 40.04 12.63 91.53
MPI_scaffold_419 MPI_Clostridiales_38_10_18
Order: Clostridiales (64.71%)
17 21051 bp 37.02 13.68 91.29
MPI_scaffold_500 MPI_Clostridiales_38_10_103
Order: Clostridiales (56.25%)
16 18971 bp 38.51 12.35 91.66
MPI_scaffold_526 MPI_Clostridiales_38_10_22
Order: Clostridiales (68.75%)
16 18416 bp 38.21 13.24 94.45
MPI_scaffold_839 MPI_Clostridiales_38_10_33
Order: Clostridiales (50%)
16 13587 bp 37.26 13.05 91.72
MPI_scaffold_640 MPI_Clostridiales_38_10_25
Order: Clostridiales (93.75%)
16 16263 bp 40.21 11.71 96.05
MPI_scaffold_749 MPI_Clostridiales_38_10_30
Order: Clostridiales (80%)
15 14649 bp 39.18 13.33 91.60
MPI_scaffold_504 MPI_Clostridiales_38_10_20
Order: Clostridiales (66.67%)
15 18828 bp 39.25 13.42 81.42
MPI_scaffold_921 MPI_Clostridiales_38_10_34
Species: Caldisalinibacter kiritimatiensis (66.67%)
15 12794 bp 38.01 12.56 93.04
MPI_scaffold_1525 MPI_Clostridiales_38_10_115
Order: Clostridiales (71.43%)
14 9242 bp 37.98 12.71 89.62
MPI_scaffold_765 MPI_Clostridiales_38_10_31
Order: Clostridiales (78.57%)
14 14468 bp 36.65 13.25 91.03
MPI_scaffold_595 MPI_Clostridiales_38_10_24
Species: Caldisalinibacter kiritimatiensis (50%)
14 17098 bp 36.21 13.72 92.68
MPI_scaffold_2419 MPI_Clostridiales_38_10_130
Order: Clostridiales (57.14%)
14 6778 bp 34.33 12.39 72.19
MPI_scaffold_707 MPI_Clostridiales_38_10_105
Class: Clostridia (50%)
14 15120 bp 36.20 11.57 77.30
MPI_scaffold_710 MPI_Clostridiales_38_10_27
Order: Clostridiales (64.29%)
14 15074 bp 40.28 12.04 91.21
MPI_scaffold_727 MPI_Clostridiales_38_10_106
Order: Clostridiales (78.57%)
14 14935 bp 37.34 12.05 96.26
MPI_scaffold_746 MPI_Clostridiales_38_10_29
Order: Clostridiales (76.92%)
13 14666 bp 37.73 12.26 88.29
Displaying items 1-50 of 156 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.