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MPI_OP11_39_7

mpi_Pacebacteria_39_8
In projects: mpi  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: Pacebacteria  →  Microgenomates  →  Bacteria

Metagenomic Context

Parent: MPI_UNK

Properties

Avg. coverage: 7.51 Longest contig: 24.51 Kbp Bin length: 708.39 Kbp GC content: 39.15 %
Contigs count: 104 Features count: 739 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 33 / 55 MC: 1 BSCG 37 / 51 MC: 4 ASCG 9 / 38 MC: 1

Description

OP11 based on recA

Displaying items 1-50 of 104 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
MPI_scaffold_453 MPI_OP11_39_8_2
Phylum: Microgenomates (52%)
25 20061 bp 38.82 6.89 86.89
MPI_scaffold_316 MPI_OP11_39_8_1
Species: RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated (52.38%)
21 24512 bp 38.23 7.30 97.19
MPI_scaffold_558 MPI_OP11_39_8_4
Phylum: Microgenomates (78.95%)
19 17732 bp 38.59 7.01 87.00
MPI_scaffold_1116 MPI_OP11_39_8_15
Domain: Bacteria (50%)
16 11272 bp 39.58 7.70 91.50
MPI_scaffold_654 MPI_OP11_39_8_7
Domain: Bacteria (87.5%)
16 15970 bp 40.45 7.80 82.26
MPI_scaffold_660 MPI_OP11_39_8_8
Class: Pacebacteria (56.25%)
16 18198 bp 39.08 8.35 89.30
MPI_scaffold_1870 MPI_OP11_39_8_27
Domain: Bacteria (66.67%)
15 8054 bp 38.35 7.20 84.07
MPI_scaffold_624 MPI_OP11_39_8_5
Phylum: Microgenomates (60%)
15 16560 bp 37.36 7.61 87.05
MPI_scaffold_752 MPI_OP11_39_8_9
Class: Pacebacteria (85.71%)
14 14619 bp 38.22 7.78 83.52
MPI_scaffold_1863 MPI_OP11_39_8_26
Class: Pacebacteria (100%)
14 8079 bp 37.03 6.71 87.41
MPI_scaffold_1361 MPI_OP11_39_8_83
Phylum: Microgenomates (100%)
14 10008 bp 39.70 7.07 87.44
MPI_scaffold_874 MPI_OP11_39_8_11
Class: Pacebacteria (85.71%)
14 13263 bp 36.37 7.54 97.04
MPI_scaffold_637 MPI_OP11_39_8_6
Class: Pacebacteria (85.71%)
14 16325 bp 40.15 7.44 88.96
MPI_scaffold_943 MPI_OP11_39_8_13
Class: Pacebacteria (64.29%)
14 12546 bp 39.04 7.43 83.09
MPI_scaffold_950 MPI_OP11_39_8_14
Domain: Bacteria (78.57%)
14 12475 bp 36.26 7.78 73.25
MPI_scaffold_514 MPI_OP11_39_8_3
Class: Pacebacteria (76.92%)
13 18674 bp 39.72 7.19 90.25
MPI_scaffold_1333 MPI_OP11_39_8_21
Class: Pacebacteria (76.92%)
13 12986 bp 40.53 7.43 93.24
MPI_scaffold_2965 MPI_OP11_39_8_43
Class: Pacebacteria (92.31%)
13 5863 bp 37.44 6.78 97.63
MPI_scaffold_1944 MPI_OP11_39_8_28
Class: Pacebacteria (76.92%)
13 7848 bp 37.65 6.75 85.09
MPI_scaffold_924 MPI_OP11_39_8_12
Class: Pacebacteria (76.92%)
13 12779 bp 39.45 8.18 90.17
MPI_scaffold_1212 MPI_OP11_39_8_19
Domain: Bacteria (84.62%)
13 10784 bp 39.98 7.84 93.61
MPI_scaffold_1147 MPI_OP11_39_8_16
Class: Pacebacteria (75%)
12 11115 bp 41.90 7.53 91.71
MPI_scaffold_1151 MPI_OP11_39_8_17
Class: Pacebacteria (50%)
12 11106 bp 38.20 7.16 91.55
MPI_scaffold_1194 MPI_OP11_39_8_18
Class: Pacebacteria (83.33%)
12 10884 bp 37.80 7.17 85.94
MPI_scaffold_1422 MPI_OP11_39_8_23
Class: Pacebacteria (70%)
10 9699 bp 37.22 7.22 90.84
MPI_scaffold_822 MPI_OP11_39_8_10
Class: Pacebacteria (77.78%)
9 13818 bp 38.99 7.16 93.36
MPI_scaffold_1864 MPI_new_44_37_29
Phylum: Microgenomates (77.78%)
9 8073 bp 41.37 6.19 99.81
MPI_scaffold_2141 MPI_OP11_39_8_29
Phylum: Microgenomates (55.56%)
9 7383 bp 40.73 7.04 92.81
MPI_scaffold_1407 MPI_OP11_39_8_22
Class: Pacebacteria (55.56%)
9 9763 bp 36.27 7.40 75.56
MPI_scaffold_3226 MPI_OP11_39_8_46
Class: Pacebacteria (66.67%)
9 5508 bp 40.40 7.35 80.28
MPI_scaffold_1217 MPI_OP11_39_8_20 9 10771 bp 39.53 7.33 91.94
MPI_scaffold_2244 MPI_OP11_39_8_31
Class: Pacebacteria (88.89%)
9 7178 bp 37.20 8.01 95.00
MPI_scaffold_2304 MPI_OP11_39_8_33
Class: Pacebacteria (62.5%)
8 7023 bp 39.13 6.91 92.91
MPI_scaffold_2312 MPI_OP11_39_8_34
Phylum: Microgenomates (75%)
8 7003 bp 38.61 7.71 97.97
MPI_scaffold_2616 MPI_OP11_39_8_39
Class: Pacebacteria (62.5%)
8 6368 bp 41.27 6.95 88.14
MPI_scaffold_1611 MPI_new_44_37_24
Phylum: Microgenomates (87.5%)
8 8942 bp 41.14 6.43 91.79
MPI_scaffold_1663 MPI_OP11_39_8_25
Species: GWF2_OP11_38_9 (50%)
8 8759 bp 39.54 7.56 93.64
MPI_scaffold_2974 MPI_OP11_39_8_44
Phylum: Microgenomates (50%)
8 5841 bp 42.72 7.19 91.88
MPI_scaffold_2300 MPI_OP11_39_8_32
Class: Pacebacteria (85.71%)
7 7037 bp 37.91 7.11 92.26
MPI_scaffold_3090 MPI_OP11_39_8_45
Phylum: Microgenomates (85.71%)
7 5702 bp 40.78 6.23 95.18
MPI_scaffold_2324 MPI_OP11_39_8_35
Domain: Bacteria (71.43%)
7 6978 bp 41.04 6.13 95.53
MPI_scaffold_2345 MPI_OP11_39_8_36
Class: Pacebacteria (71.43%)
7 6952 bp 40.30 7.55 88.38
MPI_scaffold_2690 MPI_OP11_39_8_40
Class: Pacebacteria (71.43%)
7 6535 bp 41.50 6.81 87.50
MPI_scaffold_2708 MPI_OP11_39_8_41
Class: Pacebacteria (57.14%)
7 6204 bp 40.34 6.69 99.18
MPI_scaffold_2223 MPI_OP11_39_8_30
Class: Pacebacteria (85.71%)
7 7215 bp 37.80 7.62 94.47
MPI_scaffold_5615 MPI_OP11_39_8_69
Species: RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated (50%)
6 3706 bp 38.64 7.96 94.87
MPI_scaffold_4629 MPI_OP11_39_8_61
Species: CG_Pacebac_02 (66.67%)
6 4233 bp 37.80 7.62 90.57
MPI_scaffold_3607 MPI_OP11_39_8_51
Domain: Bacteria (66.67%)
6 5083 bp 41.31 7.72 98.15
MPI_scaffold_2591 MPI_OP11_39_8_38
Class: Pacebacteria (66.67%)
6 6395 bp 38.83 7.70 90.16
MPI_scaffold_4649 MPI_OP11_39_8_62
Class: Pacebacteria (50%)
6 4223 bp 40.28 7.10 97.61
Displaying items 1-50 of 104 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.