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MPI_scaffold_12300_1

Organism: MPI_Thermoplasmata_48_7

partial RP 8 / 55 BSCG 10 / 51 ASCG 15 / 38 MC: 3
Location: 2..529

Top 3 Functional Annotations

Value Algorithm Source
Nmd3 KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 173.0
  • Bit_score: 151
  • Evalue 1.70e-34
Nmd3 {ECO:0000313|EMBL:AGN27201.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methan UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 173.0
  • Bit_score: 151
  • Evalue 8.40e-34
NMD protein affecting ribosome stability and mRNA decay similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 124
  • Evalue 4.20e-26

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Taxonomy

Candidatus Methanomassiliicoccus intestinalis → Methanomassiliicoccus → Methanomassiliicoccales → Thermoplasmata → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 528
GCCGTTGGCGATCGGCAGGTCTTTATCTCAAAGGTGGAGGAGATGCACGGCGGTCTGGACATTTATCTTTCTTCGATGTCCCTCAGCAAATCCATAGCTCACGAGCTGGTCAACGAGTTTGGAGCCGAGATGAAGGAATCGTCGTCACTCGTCGGCAGAAAAGGAGGTGAGAACGTATACCGCGCTACGCATCTGGTACGCCTCCCACCTTACAAGCTCAACGACATACTGGATTATGAGGGTACGCCACATCAGTTGGTGGGCATCAACCGTAATTCCGCAAAATTGCTCTCGCTACGCAACTTCCAGTTTATCAACGTCAGACTGCCGGAGCTGCAGAAGATGAAGGTCTTTGGCAGCGAAAAGGAGATCGCGGAGACGGTGGTCATCGCCAGATATGAACGTGAGATCCAGGTACTGCACCCTATCAACTATTCCACTGTGTCGTTGAGGACACCGCCTGGCTATCGCAGCGGCGACACGGCAAGGGTTTTCCTCCTCGACGATGAGTTGTTCCTGGTGCCCTGA
PROTEIN sequence
Length: 176
AVGDRQVFISKVEEMHGGLDIYLSSMSLSKSIAHELVNEFGAEMKESSSLVGRKGGENVYRATHLVRLPPYKLNDILDYEGTPHQLVGINRNSAKLLSLRNFQFINVRLPELQKMKVFGSEKEIAETVVIARYEREIQVLHPINYSTVSLRTPPGYRSGDTARVFLLDDELFLVP*