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MPI_scaffold_464_12

Organism: MPI_Clostridia_33_59_partial

partial RP 34 / 55 MC: 4 BSCG 35 / 51 MC: 3 ASCG 6 / 38
Location: 10693..11802

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=Caldatribacterium californiense UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 371.0
  • Bit_score: 492
  • Evalue 5.50e-136
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 367.0
  • Bit_score: 491
  • Evalue 2.50e-136
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 490
  • Evalue 3.60e-136

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Taxonomy

Caldatribacterium californiense → Caldatribacterium → Atribacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGGCAAAGAAAAAGAAAATAGAAGGCTTAATTGAAAAAGGAAAAGAAAAAAGCTATCTTACGTTTCAGGAAATAGAAAACTACCTGGAAGATGAAATACTTAATATTAATAAAATCGAGGACCTGTATGATGCCCTTAACAGTTCCGGAGTGGACGTGATTGATGAACAAGAAAAAGAAGAGGAAGAGGCTACTGAGGAAAAAGGAAAAAGAAAAAAAACCGGAATAGACGTTATTTCGAAAAAAGATTTACCAACTGAGATAGTAATTGGCAAGGGGTTTGAGTTAGATGACCCGGTAAAGATGTATTTGAAAGAAATTGGCCAAATCAGGCTGTTAAGTGCAGATGAAGAAATAGAATTAGCAAAACGTATGGAAGCAGGAGACAAAGAGGCAAAAAGAATATTAGTGCAGTCCAATCTGAGATTAGTAGTAAGTATTGCCAAAAGATACGTAGGCAGAGGAATGCTTTTTCTAGATTTAATCCAGGAAGGCAATATGGGATTAATAAGGGCTGTTGAAAAATTCGATTACAGAAGAGGTTATAAATTTAGCACCTATGCAACCTGGTGGATTAGACAAGCAATTACCCGTGCTATTGCTGATCAGGCAAGAACTATTCGAGTACCTGTGCACATGGTTGAGACAATAAACAAATTAGTAAGGGTATCAAGATATCTTTTACAGGAACTGGGTCGGGAACCAACAATTGAAGAAATCGCAGAAAGAATGGAACTTCCTTTAGAAAAGATAAAAGCTATAATCAAAACAGCACAGGAACCAGTTTCCTTGGAAAGCCCTATTGGTAAAGAGGATGACAGTCACCTGGGTGATTTTATAGAAGACGAAGACTCACCGGCTCCTCCCAAGATAGCTTCTCATACTCTGTTAAAAGAACAGCTTGATGGAGTATTAAAGACATTAACTCAACGGGAAAAGCGGGTTCTGGAATTAAGGTTTGGAATTACTGACGGACATCCACATACCCTGGAAGAGGTTGGTAGAGAATTCGGCGTTACCCGAGAGAGAATTAGACAAATTGAGGCTAAGGCACTTAGAAAGTTAAGACATCCCAGCCGTAGTAAAAAGTTGCGGGATTATCTTGATTAA
PROTEIN sequence
Length: 370
MAKKKKIEGLIEKGKEKSYLTFQEIENYLEDEILNINKIEDLYDALNSSGVDVIDEQEKEEEEATEEKGKRKKTGIDVISKKDLPTEIVIGKGFELDDPVKMYLKEIGQIRLLSADEEIELAKRMEAGDKEAKRILVQSNLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIRAVEKFDYRRGYKFSTYATWWIRQAITRAIADQARTIRVPVHMVETINKLVRVSRYLLQELGREPTIEEIAERMELPLEKIKAIIKTAQEPVSLESPIGKEDDSHLGDFIEDEDSPAPPKIASHTLLKEQLDGVLKTLTQREKRVLELRFGITDGHPHTLEEVGREFGVTRERIRQIEAKALRKLRHPSRSKKLRDYLD*