ggKbase home page
Advanced Search
Search Help

MPJ_Clostridiales_45_118_partial

mpj_Clostridiales_45_222
In projects: mpj

Consensus taxonomy: Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Metagenomic Context

Parent: MPJ_UNK

Properties

Avg. coverage: 222.22 Longest contig: 200.08 Kbp Bin length: 2.34 Mbp GC content: 45.30 %
Contigs count: 263 Features count: 2372 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 3 ASCG 2 / 38 MC: 1
Displaying items 1-50 of 263 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
MPJ_scaffold_16 MPJ_Clostridiales_45_182_partial_1
Order: Clostridiales (74.12%)
170 200078 bp 46.13 319.48 92.01
MPJ_scaffold_132 MPJ_Clostridiales_45_182_partial_3
Order: Clostridiales (88.16%)
76 78552 bp 47.30 306.90 89.59
MPJ_scaffold_273 MPJ_Clostridiales_45_182_partial_4
Order: Clostridiales (82.76%)
58 59790 bp 44.26 317.55 87.43
MPJ_scaffold_222 MPJ_Clostridiales_45_182_partial_5
Order: Clostridiales (80.7%)
57 58900 bp 46.92 301.77 87.89
MPJ_scaffold_58 MPJ_Clostridiales_45_182_partial_6
Class: Clostridia (52.83%)
53 52721 bp 42.02 345.87 95.79
MPJ_scaffold_103 MPJ_Clostridiales_45_182_partial_10
Order: Clostridiales (81.63%)
49 42774 bp 43.86 317.70 84.04
MPJ_scaffold_192 MPJ_Clostridiales_45_182_partial_11
Order: Clostridiales (68.75%)
48 38761 bp 45.15 312.61 82.39
MPJ_scaffold_78 MPJ_Clostridiales_45_182_partial_8
Order: Clostridiales (78.26%)
46 47554 bp 46.18 300.12 86.57
MPJ_scaffold_188 MPJ_Clostridiales_45_182_partial_9
Order: Clostridiales (81.4%)
43 43767 bp 46.03 316.97 88.27
MPJ_scaffold_326 MPJ_Clostridiales_45_182_partial_12
Order: Clostridiales (71.79%)
39 35432 bp 43.94 336.02 89.33
MPJ_scaffold_143 MPJ_Clostridiales_45_182_partial_14
Order: Clostridiales (86.11%)
36 33954 bp 45.17 315.83 86.79
MPJ_scaffold_163 MPJ_Clostridiales_45_182_partial_15
Order: Clostridiales (62.86%)
35 32394 bp 46.85 333.03 82.05
MPJ_scaffold_198 MPJ_Clostridiales_45_182_partial_7
Order: Clostridiales (63.64%)
33 51011 bp 46.13 303.97 87.98
MPJ_scaffold_135 MPJ_Clostridiales_45_182_partial_13
Order: Clostridiales (96.77%)
31 34961 bp 47.72 312.01 89.90
MPJ_scaffold_218 MPJ_Clostridiales_45_182_partial_18
Order: Clostridiales (76.67%)
30 27620 bp 47.03 301.00 78.80
MPJ_scaffold_248 MPJ_Clostridiales_45_182_partial_21
Order: Clostridiales (71.43%)
28 26172 bp 47.96 308.18 83.52
MPJ_scaffold_299 MPJ_Clostridiales_45_182_partial_25
Order: Clostridiales (51.85%)
27 22939 bp 49.17 305.69 84.79
MPJ_scaffold_628 MPJ_Clostridiales_45_182_partial_22
Order: Clostridiales (55.56%)
27 25240 bp 47.98 311.82 85.35
MPJ_scaffold_227 MPJ_Clostridiales_45_182_partial_20
Order: Clostridiales (64%)
25 27136 bp 47.87 297.38 83.77
MPJ_scaffold_259 MPJ_Clostridiales_45_182_partial_23
Class: Clostridia (60.87%)
23 25046 bp 36.86 339.39 91.86
MPJ_scaffold_502 MPJ_Clostridiales_45_182_partial_27
Order: Clostridiales (81.82%)
22 20377 bp 47.66 307.95 77.78
MPJ_scaffold_175 MPJ_Clostridiales_45_182_partial_17
Order: Clostridiales (80.95%)
21 30001 bp 49.18 296.67 89.30
MPJ_scaffold_916 MPJ_Clostridiales_45_182_partial_29
Order: Clostridiales (73.68%)
19 19210 bp 45.26 319.90 89.17
MPJ_scaffold_486 MPJ_Clostridiales_45_182_partial_16
Order: Clostridiales (63.16%)
19 30410 bp 45.45 324.01 84.45
MPJ_scaffold_353 MPJ_Clostridiales_45_182_partial_26
Genus: Desulfotomaculum (57.89%)
19 22601 bp 45.67 326.11 69.28
MPJ_scaffold_277 MPJ_Clostridiales_45_182_partial_24
Order: Clostridiales (50%)
18 24026 bp 46.40 314.01 79.96
MPJ_scaffold_388 MPJ_Clostridiales_45_182_partial_30
Order: Clostridiales (52.94%)
17 18611 bp 44.24 325.49 82.32
MPJ_scaffold_223 MPJ_Clostridiales_45_182_partial_19
Order: Clostridiales (58.82%)
17 27242 bp 39.53 349.50 91.12
MPJ_scaffold_430 MPJ_Clostridiales_45_182_partial_31
Order: Clostridiales (50%)
16 17347 bp 44.20 329.91 85.95
MPJ_scaffold_542 MPJ_Clostridiales_45_182_partial_36
Order: Clostridiales (81.25%)
16 14290 bp 44.70 331.75 82.27
MPJ_scaffold_615 MPJ_Clostridiales_45_182_partial_34
Order: Clostridiales (75%)
16 17023 bp 43.29 321.23 82.74
MPJ_scaffold_396 MPJ_Clostridiales_45_182_partial_28
Order: Clostridiales (60%)
15 19269 bp 47.99 336.80 85.60
MPJ_scaffold_724 MPJ_Clostridiales_45_182_partial_39
Order: Clostridiales (73.33%)
15 11435 bp 41.36 9.27 98.04
MPJ_scaffold_437 MPJ_Clostridiales_45_182_partial_33
Order: Clostridiales (71.43%)
14 17171 bp 45.41 307.45 89.35
MPJ_scaffold_3868 MPJ_Clostridiales_45_182_partial_38
Class: Clostridia (61.54%)
13 12419 bp 46.13 310.21 69.52
MPJ_scaffold_932 MPJ_Clostridiales_45_182_partial_35
Species: Moorella thermoacetica (50%)
12 15285 bp 45.10 309.55 95.76
MPJ_scaffold_909 MPJ_Clostridiales_45_182_partial_46
Class: Clostridia (72.73%)
11 9881 bp 43.50 8.40 95.06
MPJ_scaffold_1688 MPJ_Clostridiales_45_182_partial_79
Order: Clostridiales (54.55%)
11 6734 bp 44.09 325.85 74.13
MPJ_scaffold_926 MPJ_Clostridiales_45_182_partial_47
Species: Peptococcaceae bacterium SCADC1_2_3 (72.73%)
11 9713 bp 41.93 9.06 92.07
MPJ_scaffold_446 MPJ_Clostridiales_45_182_partial_32
Order: Clostridiales (54.55%)
11 17255 bp 48.92 302.56 54.84
MPJ_scaffold_735 MPJ_Clostridiales_45_182_partial_40
Order: Clostridiales (90.91%)
11 11349 bp 48.07 8.64 80.20
MPJ_scaffold_993 MPJ_Clostridiales_45_182_partial_51
Order: Clostridiales (72.73%)
11 9304 bp 50.23 285.76 94.73
MPJ_scaffold_1507 MPJ_Clostridiales_45_182_partial_73
Order: Clostridiales (54.55%)
11 7187 bp 41.96 7.55 59.19
MPJ_scaffold_761 MPJ_Clostridiales_45_182_partial_42
Species: Desulfotomaculum gibsoniae (54.55%)
11 11038 bp 47.12 303.34 89.47
MPJ_scaffold_1530 MPJ_Clostridiales_45_182_partial_43
Order: Clostridiales (72.73%)
11 10523 bp 47.86 314.62 83.10
MPJ_scaffold_1286 MPJ_Clostridiales_45_182_partial_63
Order: Clostridiales (72.73%)
11 7896 bp 46.96 8.04 86.82
MPJ_scaffold_1296 MPJ_Clostridiales_45_182_partial_65
Order: Clostridiales (63.64%)
11 7841 bp 43.97 8.35 82.26
MPJ_scaffold_637 MPJ_Clostridiales_45_182_partial_37
Order: Clostridiales (63.64%)
11 12648 bp 44.54 400.36 81.14
MPJ_scaffold_987 MPJ_Clostridiales_45_182_partial_49
Species: Acetohalobium arabaticum (70%)
10 9362 bp 44.76 8.55 79.34
MPJ_scaffold_1005 MPJ_Clostridiales_45_182_partial_48
Species: Desulfotomaculum acetoxidans (60%)
10 9652 bp 44.24 325.30 91.44
Displaying items 1-50 of 263 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.