ggKbase home page

MPJ_scaffold_1752_7

Organism: MPJ_Clostridia_34_48_mix

megabin RP 46 / 55 MC: 22 BSCG 45 / 51 MC: 21 ASCG 10 / 38 MC: 4
Location: 4405..5340

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B (EC:4.2.1.70) KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 310.0
  • Bit_score: 226
  • Evalue 1.30e-56
Marine sediment metagenome DNA, contig: S01H1_L00572 {ECO:0000313|EMBL:GAF84867.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 309.0
  • Bit_score: 245
  • Evalue 9.90e-62
tRNA pseudouridine synthase B similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 235
  • Evalue 3.00e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 936
ATGATAAATGGTGTTTTAAACATTAATAAGCCTGAAGGTATTACTTCAGCAAAAGTCGTTCAAATAATTAAAAAAAAACTAAAATGTAACAAGGCAGGACACACTGGAACACTGGATCCTTTTGCAACTGGAGTATTGCTTGTTTGCATTAACAAGGCCACTAAAATTGCCCAATACCTTTCAATATTAGACAAAGAATACATCGGTACCATGATCTTGGGCATTGCAACTGATACTCAAGATTTAAAGGGCAAAATAATTAATATAAAATCTATTGAACAAAGTATGCTCAATTATAAAAGGATTAATGACGTATTTAAAAGTTTCCTTGGAAATATATGGCAAAAACCCCCTGTTTTTTCAGCAAAAAAACACAAAGGTGTTAGACTATATACCTTTGCGAGAAAAGGTATTAAAGTAGATTTATCTCCACATAGGGTAACAATACATAATATAAGCATTCTAAAAATAGTTTATGATAGTTTCCCAAGTATTGTTTTCAAAATAAAATGTTCAAAAGGAACTTATATTAGGGCACTATGCAATGATATTGGAGAAAAATTGGGTTGTGGTGCTTATTTGTCTCAACTTAAGAGAACTGAAGTAGGCAATTATAATATAGGTCATTCTATTAATTTAGATAGTTTTTTAGAAAAGCAATATAAGGAGCAAAATAAGTACATAGTAACAATGGACCAATCTCTAAGCCAATACAAAAAACTAATATTGAGAAAAGACGAGAATCTAACAGCAAGAATCAGAAATGGAAATCAGTTTTCAGACAACGAGATAGATTTTATAGACAATGGAAAGGCAAATACTCCCGGGGGTATATTTAGAGTTTGCTCAAATGATGGCGATTTGATTGCGATAGCAAAAGTAATTGAGGAATCTGGTTATCCAAAAAAATATAAGGTTACAAAGGTATTCGTATGA
PROTEIN sequence
Length: 312
MINGVLNINKPEGITSAKVVQIIKKKLKCNKAGHTGTLDPFATGVLLVCINKATKIAQYLSILDKEYIGTMILGIATDTQDLKGKIINIKSIEQSMLNYKRINDVFKSFLGNIWQKPPVFSAKKHKGVRLYTFARKGIKVDLSPHRVTIHNISILKIVYDSFPSIVFKIKCSKGTYIRALCNDIGEKLGCGAYLSQLKRTEVGNYNIGHSINLDSFLEKQYKEQNKYIVTMDQSLSQYKKLILRKDENLTARIRNGNQFSDNEIDFIDNGKANTPGGIFRVCSNDGDLIAIAKVIEESGYPKKYKVTKVFV*