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MPJ_scaffold_10536_3

Organism: MPJ_Nov_42_6_partial

partial RP 25 / 55 MC: 2 BSCG 22 / 51 MC: 1 ASCG 2 / 38
Location: comp(1481..2041)

Top 3 Functional Annotations

Value Algorithm Source
pfr:PFREUD_05610 rpoC; DNA-directed RNA polymerase beta chain (RNAP beta subunit) (transcriptase beta chain) (RNA polymerase beta subunit) (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] alias=ACD13_11237.143636.20G0003,ACD13_11237.143636.20_3,ACD13_C00029G00003 id=7078 tax=ACD13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=OP11 similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 200
  • Evalue 4.90e-49
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKU13370.1}; TaxID=1618932 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;" UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 186.0
  • Bit_score: 212
  • Evalue 7.30e-52
DNA-directed RNA polymerase subunit beta' KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 173.0
  • Bit_score: 181
  • Evalue 1.60e-43

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Taxonomy

Parcubacteria bacterium GW2011_GWC2_45_7 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 561
TATTTTGTTTCTCCGGCAAATCAGCTTTTGGTGCATGACAAAGAGAAGGTTTTGGCCGGAACACAACTGGCCGCTGGGGCTTTAGACGTAGAAGAAGTTTTAAAAATTCGGGGTCTGCGGGCGGCGCAGGAATATCTTTTGGATAGTATTCAGGGGGTTTACGAGTCGCAAAATATTGGCATTAACGACCGCCATTTTGAGGTGATTATCAGGAGAATGAGCGACAAGGTGCAAATTGTTGATGCCGGCGATACGAAATTTATTGTCGGTAGTTTTGTTGACCTGCTGCGTTTTCGCAAGGTAAACGAAAAAGCAAAGGAGAGAAAGATTAAACCGGCCCGGGGGAAGCGGTTAATCTTAGGCTTAACCAAAGTAGCGCTTTATACCGATTCTTGGCTTTCGGCGGCTTCTTTTCAGGAAACGGTCAATGTTTTAACGCAGGCGTCGCTTGAGGGCCGGGTGGATAATTTAGTGGGGATGAAGGAAAATGTGATTATTGGCCGCTTAATCCCCGTTTCCCCCGAGCAGGTAGTTTTAGAGGAAGACCGGCTGGAATTTTAA
PROTEIN sequence
Length: 187
YFVSPANQLLVHDKEKVLAGTQLAAGALDVEEVLKIRGLRAAQEYLLDSIQGVYESQNIGINDRHFEVIIRRMSDKVQIVDAGDTKFIVGSFVDLLRFRKVNEKAKERKIKPARGKRLILGLTKVALYTDSWLSAASFQETVNVLTQASLEGRVDNLVGMKENVIIGRLIPVSPEQVVLEEDRLEF*