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ACD10_295_3 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Putative Sigma-54 dependent transcriptional regulator n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P1N7_AZOSE (db=UNIREF evalue=3.0e-120 bit_score=436.0 identity=51.33 coverage=90.6122448979592) similarity UNIREF
DB: UNIREF
51.33 90.61 436 3.00e-120 eba:ebA4696
sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
51.0 451.0 426 9.90e-117 eba:ebA4696
sigma-54 dependent transcriptional regulator rbh KEGG
DB: KEGG
51.0 451.0 426 9.90e-117 eba:ebA4696
seg (db=Seg db_id=seg from=450 to=463) iprscan interpro
DB: Seg
null null null null eba:ebA4696
SIGMA54_INTERACT_1 (db=PatternScan db_id=PS00675 from=165 to=178 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) iprscan interpro
DB: PatternScan
null null null 0.0 eba:ebA4696
SIGMA54_INTERACT_3 (db=PatternScan db_id=PS00688 from=355 to=364 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) iprscan interpro
DB: PatternScan
null null null 0.0 eba:ebA4696
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=140 to=383 evalue=7.3e-72) iprscan interpro
DB: superfamily
null null null 7.30e-72 eba:ebA4696
Sigma54_activat (db=HMMPfam db_id=PF00158 from=141 to=307 evalue=4.4e-69 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) iprscan interpro
DB: HMMPfam
null null null 4.40e-69 eba:ebA4696
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=139 to=313 evalue=2.5e-68) iprscan interpro
DB: Gene3D
null null null 2.50e-68 eba:ebA4696
Homeodomain-like (db=superfamily db_id=SSF46689 from=355 to=444 evalue=1.0e-16 interpro_id=IPR009057 interpro_description=Homeodomain-like) iprscan interpro
DB: superfamily
null null null 1.00e-16 eba:ebA4696
no description (db=Gene3D db_id=G3DSA:1.10.8.60 from=314 to=385 evalue=2.4e-14) iprscan interpro
DB: Gene3D
null null null 2.40e-14 eba:ebA4696
no description (db=HMMSmart db_id=SM00382 from=161 to=304 evalue=9.0e-12 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111)) iprscan interpro
DB: HMMSmart
null null null 9.00e-12 eba:ebA4696
HTH_8 (db=HMMPfam db_id=PF02954 from=403 to=436 evalue=1.9e-10 interpro_id=IPR002197 interpro_description=Helix-turn-helix, Fis-type GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 1.90e-10 eba:ebA4696
CheY-like (db=superfamily db_id=SSF52172 from=1 to=186 evalue=5.2e-09 interpro_id=IPR011006 interpro_description=CheY-like) iprscan interpro
DB: superfamily
null null null 5.20e-09 eba:ebA4696
HTHFIS (db=FPrintScan db_id=PR01590 from=407 to=424 evalue=4.0e-08 interpro_id=IPR020441 interpro_description=Helix-turn-helix, Fis GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 4.00e-08 eba:ebA4696
HTHFIS (db=FPrintScan db_id=PR01590 from=424 to=444 evalue=4.0e-08 interpro_id=IPR020441 interpro_description=Helix-turn-helix, Fis GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 4.00e-08 eba:ebA4696
SIGMA54_INTERACT_4 (db=ProfileScan db_id=PS50045 from=141 to=371 evalue=62.809 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) iprscan interpro
DB: ProfileScan
null null null 6.28e+01 eba:ebA4696
Putative Sigma-54 dependent transcriptional regulator n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P1N7_AROAE similarity UNIREF
DB: UNIREF90
51.0 null 426 1.50e-116 eba:ebA4696
Putative Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:CAI08777.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" so UNIPROT
DB: UniProtKB
51.0 451.0 426 4.90e-116 Q5P1N7_AROAE