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gwc2_scaffold_321_66

Organism: GWC2_OD1_36_9

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 54393..54971

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKQ05659.1}; TaxID=1618769 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF1_36_47.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 380
  • Evalue 1.20e-102
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 180.0
  • Bit_score: 153
  • Evalue 6.40e-35
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 156
  • Evalue 9.00e+00

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Taxonomy

GWF1_OD1_36_47 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGATAGATACGCGATCTTGTGAAAGTAAAACAGATGAAGAACTAGTCGGATTGTCCCTGAAAGATTCTGATTACTTTTTTTGCTTATCGAAAAGATATGAAGAAAAGTTATTGCGGTACATCACACATATTTCAAAATTTAGTCGAGAAGACTCCGAAGATGTTCTTCAGGAGGTCTTTATTAAAACTTATTACAATTTGAATGGTTTTGATCCTAGTCTTAAATTTTCTTCTTGGATATATCGCATAGCTCACAATGAAGCAGTAAGTGCTATAAGAAAGAAAGTTGCTAGACCAACTCTCTATCTAGAAGAGGGAGACTTGGAGAAATTTGGAGATGTTTTTGATATGGTTAAAGATGTAGATAATTCTATAGATAGGAAAGCGATAGATATAGCTCTTTCAAATTTAGACGAAAAGTATAGGGAAGTATTGGTCTTGCGATTCCTAGACGAGAAGGATTATGTGGAGATATCCGATATTCTAAAGAAACCAGTAAGTACAGTAGGGAACTTGATATTAAGAGGTAAAAAGCTTTTTAAATATGAATATGAAAAATTAATAGGAGTCAGTGTATAG
PROTEIN sequence
Length: 193
MIDTRSCESKTDEELVGLSLKDSDYFFCLSKRYEEKLLRYITHISKFSREDSEDVLQEVFIKTYYNLNGFDPSLKFSSWIYRIAHNEAVSAIRKKVARPTLYLEEGDLEKFGDVFDMVKDVDNSIDRKAIDIALSNLDEKYREVLVLRFLDEKDYVEISDILKKPVSTVGNLILRGKKLFKYEYEKLIGVSV*