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MEL_B1_7_41 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase subunit gamma n=1 Tax=Gloeobacter violaceus PCC 7421 RepID=RPOC1_GLOVI (db=UNIREF evalue=0.0 bit_score=791.0 identity=66.1 coverage=98.24561403508771) similarity UNIREF
DB: UNIREF
66.1 98.25 791 0.0 gvi:gvip556
rpoC1; DNA-directed RNA polymerase subunit gamma (EC:2.7.7.6) similarity KEGG
DB: KEGG
67.4 605.0 791 1.40e-226 gvi:gvip556
rpoC1; DNA-directed RNA polymerase subunit gamma (EC:2.7.7.6) rbh KEGG
DB: KEGG
67.4 605.0 791 1.40e-226 gvi:gvip556
seg (db=Seg db_id=seg from=206 to=217) iprscan interpro
DB: Seg
null null null null gvi:gvip556
seg (db=Seg db_id=seg from=115 to=126) iprscan interpro
DB: Seg
null null null null gvi:gvip556
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=5 to=568 evalue=0.0) iprscan interpro
DB: HMMPanther
null null null 0.0 gvi:gvip556
rpoC1_cyan: DNA-directed RNA polymerase, g (db=HMMTigr db_id=TIGR02387 from=7 to=569 evalue=0.0 interpro_id=IPR012755 interpro_description=DNA-directed RNA polymerase, subunit gamma GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr
null null null 0.0 gvi:gvip556
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=5 to=568 evalue=0.0) iprscan interpro
DB: HMMPanther
null null null 0.0 gvi:gvip556
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=5 to=568 evalue=2.4e-232) iprscan interpro
DB: superfamily
null null null 2.40e-232 gvi:gvip556
no description (db=HMMSmart db_id=SM00663 from=228 to=507 evalue=1.5e-181 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMSmart
null null null 1.50e-181 gvi:gvip556
no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=4 to=338 evalue=4.3e-124) iprscan interpro
DB: Gene3D
null null null 4.30e-124 gvi:gvip556
(db=HMMPfam db_id=PF04997 from=8 to=335 evalue=1.4e-92 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 1.40e-92 gvi:gvip556
(db=HMMPfam db_id=PF00623 from=337 to=478 evalue=2.2e-52 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 2.20e-52 gvi:gvip556
no description (db=Gene3D db_id=G3DSA:2.40.40.30 from=339 to=481 evalue=4.4e-31) iprscan interpro
DB: Gene3D
null null null 4.40e-31 gvi:gvip556
(db=HMMPfam db_id=PF04983 from=482 to=564 evalue=8.5e-17 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 8.50e-17 gvi:gvip556
RNApol_bact_RpoC1 (db=HAMAP db_id=MF_01323 from=4 to=569 evalue=33.452) iprscan interpro
DB: HAMAP
null null null 3.35e+01 gvi:gvip556
amr:AM1_3593 rpoC1; DNA-directed RNA polymerase subunit gamma; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] alias=MEL_C2_C00006G00038 id=471389 tax=MEL_C2 species=unknown genus=unknown taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria similarity UNIREF
DB: UNIREF90
99.8 null 1129 0.0 gvi:gvip556
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxel UNIPROT
DB: UniProtKB
99.6 569.0 1129 0.0 R5SYY9_9GAMM