ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

qh_1_scaffold_10162_3

Organism: qh_1_UNK

partial RP 42 / 55 MC: 36 BSCG 39 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: 1034..1504

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL13_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 156.0
  • Bit_score: 241
  • Evalue 5.10e-61
rpl13p; 50S ribosomal protein L13P similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 156.0
  • Bit_score: 241
  • Evalue 1.40e-61
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 156.0
  • Bit_score: 241
  • Evalue 7.20e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 471
ATGAGCTACGCGGAGTTCGACGCCGACGTCGTCGTCGACGCCCGCGACTGTATCGTCGGCCGCGTCGCCTCGCAGGTCGCCCAGCGCGCGCTGGACGGCGAGGCCGTGGCCGTGGTCAACGCCGAGCAGGCGGTCATCACCGGCAGCGAGGAGGACGTCATGTCCGTCTACCGGCAGCGGGACGCGGTCGGCTCCGACCAGGGGCCGAACTACCCCAAGCGTCCGGACCGCATCTTCAAGCGGGCCGTCCGCGGGATGGTCCCGTACAAGAAGGACCGCGGTCGGGAGGCACTCGGCCGGCTGCGCGTCTACGTGGGCAACCCCTACGACGCGGCGTCGTCGCGAGGCGAAGACGGCAAAGCCGTCGAAGCGGAGGTCCTCGAGGACACCTCGCTGGATCGGCTGTCGAACATCAAGTTCGTCTCGCTCGGCACGGTGAGCGAGAACCTGGGTGCTAACGTCACATGGTAA
PROTEIN sequence
Length: 157
MSYAEFDADVVVDARDCIVGRVASQVAQRALDGEAVAVVNAEQAVITGSEEDVMSVYRQRDAVGSDQGPNYPKRPDRIFKRAVRGMVPYKKDRGREALGRLRVYVGNPYDAASSRGEDGKAVEAEVLEDTSLDRLSNIKFVSLGTVSENLGANVTW*