ggKbase home page

qh_1_scaffold_11416_3

Organism: qh_1_UNK

partial RP 42 / 55 MC: 36 BSCG 39 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(890..1675)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE4E90 related cluster n=1 Tax=unknown RepID=UPI0003CE4E90 similarity UNIREF
DB: UNIREF100
  • Identity: 29.0
  • Coverage: 131.0
  • Bit_score: 61
  • Evalue 1.60e-06
Type IV secretion protein Rhs {ECO:0000313|EMBL:ESW92020.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi UNIPROT
DB: UniProtKB
  • Identity: 29.0
  • Coverage: 131.0
  • Bit_score: 61
  • Evalue 2.20e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LSJC269B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
CTTAAAAGTACGAAAGGAGCTCTAAAAGCAATTACGTCATATGCGGCTACAAAATTTTCATTCGGATTCGATGAGGTCGGCAGTTTGTTCGATTTCTTTACTGCGACAGAAGAGGTTTTTGGGAATGCGAAACAAGCACTAGTCGAAATCGGCAAAGGGTATCAGGATTCGACAGGTGAAGAGACTCCCGTTACAGATGCATTTAAGAGCCTGGATCGTCCTGGGATCTTCGCGACGTGTGAAGGGGGAGTTGATGTCATTTCGAAGGAGGATGTTACCCTGATCCCCGGCGGAGGATTTGCAGTATATACTCCCCTTAGTGCAGGACTGAATGCACTTGCAGGAATAGAGATGGTGTCTGGGAAGGACATAGGTATGTTTTCGAAAGAGGGAAGAATAGAAATACTAGCCGACGACGATATTGTAAAACTTTATGGTAAAAAACAAGTTGCCGCCGAGTCGGAAGAGCAAGTCGTCCTAGAATGTGGTGATTCAAAGATAATTATGAACAGCGACGGAAAAATAAAAATCAAAGGAAAGGAAATAGAGATAGAAGGAAAAAATGAGGTAGATATAGAAACGAAAAATGAAAATGCAGAACTAGAATTAGAAGGAAACAGCGTAGAGGTGAGTGGAAGCAAAGTTAAAATAGACGGAAAAAGATCAGTAAAAATAGAAGCAATGGATCTAACCTCAGAGGCAAATGGGAGTACTTTGAAGGGAACACAGATAAACATAGATGGTGAGTTCGTAAAGTTAAAAGGGTCATTGAATAAAATAGGATAA
PROTEIN sequence
Length: 262
LKSTKGALKAITSYAATKFSFGFDEVGSLFDFFTATEEVFGNAKQALVEIGKGYQDSTGEETPVTDAFKSLDRPGIFATCEGGVDVISKEDVTLIPGGGFAVYTPLSAGLNALAGIEMVSGKDIGMFSKEGRIEILADDDIVKLYGKKQVAAESEEQVVLECGDSKIIMNSDGKIKIKGKEIEIEGKNEVDIETKNENAELELEGNSVEVSGSKVKIDGKRSVKIEAMDLTSEANGSTLKGTQINIDGEFVKLKGSLNKIG*