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qh_1_UNK

In projects: QH_1 | diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.16 Longest contig: 66.06 Kbp Bin length: 43.26 Mbp GC content: 61.13 %

Contigs count: 18764 Features count: 57383 rRNAs count: 15 tRNAs count: 0

Genome completeness

partial RP 42 / 55 MC: 36 BSCG 39 / 51 MC: 35 ASCG 38 / 38 MC: 38

Displaying items 18751-18764 of 18764 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
qh_1_scaffold_11696 Species: Naegleria gruberi (100%)	2	1650 bp	31.88	3.64	98.55
qh_1_scaffold_19768	3	1126 bp	45.38	3.64	86.06
qh_1_scaffold_17339 Species: uncultured archaeon A07HB70 (50%)	2	1244 bp	49.28	3.62	69.69
qh_1_scaffold_11869 Species: Haloarcula vallismortis (50%)	2	1632 bp	39.58	3.62	64.34
qh_1_scaffold_22234 Species: Halobacterium sp. DL1 (100%)	1	1027 bp	52.48	3.60	99.90
qh_1_scaffold_15257	1	1365 bp	45.57	3.52	21.98
qh_1_scaffold_20144	4	1110 bp	47.30	3.51	91.08
qh_1_scaffold_21359	3	1061 bp	44.02	3.49	96.70
qh_1_scaffold_19864 Species: Naegleria gruberi (100%)	2	1122 bp	26.83	3.48	84.76
qh_1_scaffold_17291 Species: Desulfococcus multivorans (100%)	1	1247 bp	48.52	3.45	99.84
qh_1_scaffold_22518 Species: Haloterrigena salina (50%)	2	1017 bp	51.52	3.44	67.55
qh_1_scaffold_21414	3	1059 bp	44.10	3.40	96.88
qh_1_scaffold_42619	2	1114 bp	29.26	3.32	80.25
qh_1_scaffold_21260	2	1065 bp	44.79	3.00	78.87

Displaying items 18751-18764 of 18764 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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