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CARSLU_90_1 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
100.0 182.0 359 4.20e-97 sln:SLUG_22690
50S ribosomal protein L1 n=101 Tax=Staphylococcus RepID=RL1_STAEQ (db=UNIREF evalue=1.0e-95 bit_score=351.0 identity=94.51 coverage=98.9071038251366) similarity UNIREF
DB: UNIREF
94.51 98.91 351 1.00e-95 sln:SLUG_22690
RIBOSOMAL_L1 (db=PatternScan db_id=PS01199 from=72 to=90 evalue=0.0 interpro_id=IPR023673 interpro_description=Ribosomal protein L1, conserved site) iprscan interpro
DB: PatternScan
null null null 0.0 sln:SLUG_22690
rplA_bact: ribosomal protein L1 (db=HMMTigr db_id=TIGR01169 from=1 to=180 evalue=5.6e-112 interpro_id=IPR005878 interpro_description=Ribosomal protein L1, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934)) iprscan interpro
DB: HMMTigr
null null null 5.60e-112 sln:SLUG_22690
50S RIBOSOMAL PROTEIN L1P (db=HMMPanther db_id=PTHR23105:SF5 from=1 to=176 evalue=2.6e-81) iprscan interpro
DB: HMMPanther
null null null 2.60e-81 sln:SLUG_22690
RIBOSOMAL PROTEIN L7AE FAMILY MEMBER (db=HMMPanther db_id=PTHR23105 from=1 to=176 evalue=2.6e-81) iprscan interpro
DB: HMMPanther
null null null 2.60e-81 sln:SLUG_22690
(db=HMMPfam db_id=PF00687 from=1 to=172 evalue=2.4e-75 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934)) iprscan interpro
DB: HMMPfam
null null null 2.40e-75 sln:SLUG_22690
Ribosomal protein, L1p/L1a/L10e/organellar L1 types (db=HMMPIR db_id=PIRSF002155 from=1 to=178 evalue=2.2e-74 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934)) iprscan interpro
DB: HMMPIR
null null null 2.20e-74 sln:SLUG_22690
Ribosomal protein L1 (db=superfamily db_id=SSF56808 from=1 to=179 evalue=8.6e-68 interpro_id=IPR023674 interpro_description=Ribosomal protein L1, superfamily GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934)) iprscan interpro
DB: superfamily
null null null 8.60e-68 sln:SLUG_22690
no description (db=Gene3D db_id=G3DSA:3.40.50.790 from=19 to=110 evalue=1.2e-37 interpro_id=IPR016095 interpro_description=Ribosomal protein L1, 3-layer alpha/beta-sandwich GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: Gene3D
null null null 1.20e-37 sln:SLUG_22690
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;" UNIPROT
DB: UniProtKB
100.0 182.0 359 2.10e-96 E6M9U5_STALU
  • SCG Annotations
  • BSCG ribosomal protein L1