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13_1_20cm_4_scaffold_1294_11

Organism: 13_1_20CM_4_Delftia_acidovorans_67_18

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(8745..8960)

Top 3 Functional Annotations

Value Algorithm Source
Putative mating pair formation transmembrane protein n=1 Tax=Cupriavidus oxalaticus RepID=Q84EN2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 134
  • Evalue 3.10e-29
Conjugal transfer TrbC transmembrane protein {ECO:0000313|EMBL:AJG13720.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 134
  • Evalue 4.30e-29
trbC; conjugal transfer TrbC transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 134
  • Evalue 8.70e-30

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Taxonomy

Pseudomonas plecoglossicida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
GGCCCGCTGCAATCCATCCTCGAATCCATCCAGGGGCCGGTGGCGCGCATCGTCGCGGTCATCATCATCATCGCCACGGGCCTCGCGCTCGCGTTCGGCGACACGTCCGGCGGGTTCCGCAAGCTGATCCAGATCGTATTCGGTCTGTCCATCGCGTTCGCCGCTTCGAGCTTCTTCCTGTCGTTCTTCAGCTTCTCCGGCGGGGCGGTCGTATGA
PROTEIN sequence
Length: 72
GPLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*