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13_1_20cm_3_scaffold_13132_4

Organism: 13_1_20CM_3_Gemmatimonas_aurantiaca_60_15

partial RP 35 / 55 MC: 1 BSCG 30 / 51 ASCG 8 / 38 MC: 1
Location: 3179..3856

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 227.0
  • Bit_score: 279
  • Evalue 4.20e-72
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RBG_16_Gemmatimonadetes_66_8_curated UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 226.0
  • Bit_score: 352
  • Evalue 4.20e-94
Type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 226.0
  • Bit_score: 289
  • Evalue 1.10e-75

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 678
ATGCCGGTCTATGAATACACAGCGCGCAACCTGAAAGGCGATCTCGTCCGCGACAAGATCGACCTTGCGACGCGCGACGAGGTCATCGCCCACCTGCGCAAGAACCGCATGGTGGTCGTCCAGGTGCGCGAAGCCAAAGGCAAAGGCGGCGGGCTCGGCGACTTTTTCAAGCCGGGCGTCAAGACCCGCGACATCGTGATCTTCACGCGCCAGTTCGCCACGATGATCAATTCGGGACTGCCGCTCGTGCAGGCGCTCGACATCCTGTCGCAGCAGACCGAGAACAAAGTCCTGGCCGACATCACGCGCCAGGTCGTGTATGACGTCGAGAGCGGTCACACCCTGGCCGACGCGATGCGGAAGCATCCCAAAGCCTTCACCGACCTCTTCGTCAACATGGTCGCAGCCGGTGAAGCGGGCGGTATTCTCGACACGATTCTGCTGCGCCTCGCGACGTTCCTGGAAAAGAACGACGCGATCGTGCGGAAGGTGAAGGGCGCGATGATCTATCCGGCGGTGATCTTCTCGGTCGCCGGCATCGCGGTCGCGGTGCTGTTGATCTTCGTGATCCCGACGTTCCAAAGCATGTTCGCGTCGGTCAACCTCGACCTGCCGCTGCCTACGCGGATCGTGATCGGGGCGAGTAACGTCCTCAAGAACTTCTGGTGGGCGATCATC
PROTEIN sequence
Length: 226
MPVYEYTARNLKGDLVRDKIDLATRDEVIAHLRKNRMVVVQVREAKGKGGGLGDFFKPGVKTRDIVIFTRQFATMINSGLPLVQALDILSQQTENKVLADITRQVVYDVESGHTLADAMRKHPKAFTDLFVNMVAAGEAGGILDTILLRLATFLEKNDAIVRKVKGAMIYPAVIFSVAGIAVAVLLIFVIPTFQSMFASVNLDLPLPTRIVIGASNVLKNFWWAII