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13_1_20cm_3_scaffold_41116_4

Organism: 13_1_20CM_3_Gemmatimonas_aurantiaca_60_15

partial RP 35 / 55 MC: 1 BSCG 30 / 51 ASCG 8 / 38 MC: 1
Location: comp(1794..2351)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 186.0
  • Bit_score: 224
  • Evalue 1.10e-55
Peptide deformylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A607_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 181.0
  • Bit_score: 198
  • Evalue 7.70e-48
Peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 186.0
  • Bit_score: 224
  • Evalue 2.20e-56

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 558
GTGAGCATTCTCGACATCCGGGTGCTGGGCGACCCGGTTCTTCGCAAACCCACGAAGCGCGTCACCGAGGTCACCGACGAGCTGCGTCAACTCATCGCCGACATGTTCGAGACGATGTACGCCGCCGAGGGCATTGGCCTCGCCGCGCCGCAGGTTGGACGCGCGGAGAGACTCGCGGTCGTCGACGTCGAGGGCAACAAGTTCACGCTGATCAATCCCGAAGTGATCGAGCGCACTGGCGACATCGATAAGGCTGAAGAAGGCTGCCTCTCCATTCCCGACATTTATGGCGACGTCGAGCGACCGTTTACAGTCACCATTCGCGCCATGAATGAGAATGGCGAGCAATACGAGGCAACGGCGTCAGAGCTTCTGGGTCGCTGCTTCCAGCACGAGATCGATCATCTCGACGGAAAGCTATTCCTGGATTATCTGAGCCCACTCAAGCGCAAAGCAGCAATGGCGAAGTGGGAGAGCGCGAAGACCGAGTATCCCGGATTTATCAGGAAAGTCAAAGCAGAGGTTCCTGGCGAGCACCATCACGAAACGGAGATGTAG
PROTEIN sequence
Length: 186
VSILDIRVLGDPVLRKPTKRVTEVTDELRQLIADMFETMYAAEGIGLAAPQVGRAERLAVVDVEGNKFTLINPEVIERTGDIDKAEEGCLSIPDIYGDVERPFTVTIRAMNENGEQYEATASELLGRCFQHEIDHLDGKLFLDYLSPLKRKAAMAKWESAKTEYPGFIRKVKAEVPGEHHHETEM*