ggKbase home page

13_1_40cm_scaffold_12077_12

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(8268..8726)

Top 3 Functional Annotations

Value Algorithm Source
Transcription activator effector binding n=1 Tax=Frankia sp. CN3 RepID=G6HK91_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 152.0
  • Bit_score: 123
  • Evalue 2.00e-25
Transcription activator effector-binding protein {ECO:0000313|EMBL:KJK48169.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevali similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 134.0
  • Bit_score: 136
  • Evalue 3.20e-29
transcription activator effector binding protein similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 154.0
  • Bit_score: 108
  • Evalue 2.40e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGGCGTATCGCGTGACGATCGAGCGGACTACCGAGTGTCCGACAGCCGTAGTCAAGGCGAACACGACCTGGCGCGAGTTCCCCACGCTGTGGCGCACGTTGCTCGACGAGGTGTGGGCGTTCCTTCGCGCCACGCCTGGCGTGCGCACCGATGGGCACAACGTGATGCTGTACAGGCACAACGTCCCCGAAGTCGAGGTCGCAGTCGAGGTTGGCGTCCAGGTAAGCAAATCCTTCCAGGCCACAGGCCGGGTAGTCCCATCGACGTTGCCCGCCGCCGAAGCCGCCGCGACAGTTCATGCAGGAACGCCCGCGGACATCGGGGCGGCGCACTCTGCGGTTCGGGCATGGTGCTCTGAGCAGCGCCGGGAGGTGACCGGCGTCTCATGGGAAATCTACGGAGACCCTGACCCTCAGACCGGCCACTTTGACGTCGCGGTGTACTGGCAACTTGCTTAG
PROTEIN sequence
Length: 153
MAYRVTIERTTECPTAVVKANTTWREFPTLWRTLLDEVWAFLRATPGVRTDGHNVMLYRHNVPEVEVAVEVGVQVSKSFQATGRVVPSTLPAAEAAATVHAGTPADIGAAHSAVRAWCSEQRREVTGVSWEIYGDPDPQTGHFDVAVYWQLA*