ggKbase home page

13_1_40cm_scaffold_136552_4

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(1749..3467)

Top 3 Functional Annotations

Value Algorithm Source
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 442.0
  • Bit_score: 498
  • Evalue 9.10e-138
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 553.0
  • Bit_score: 436
  • Evalue 1.50e-119
ABC transporter, ATP-binding protein, MsbA family id=7201107 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06 similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 465.0
  • Bit_score: 395
  • Evalue 1.00e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1719
ATGCGCCGCGGCGCCCGCTTGCTGCTGCTGCTGCGCCCCTACACGCTGCTGTTCGTCACCAACATCGTGGCGACGCTGGTGGCGTCCGTGATGGACGGGGCCACCTTCGTGCTGCTCATCCCCTTCCTGCGCGCGCTGTTCGGCCAGCAGGCGCTCCCCGCGACCGGCACCTCGGGCGTGGAGGATGTGCTCGCCAAGATCGCCGGGCCGTTCCTCGCGGCGGGGGCGCCCGAGCTCGCGCTCCGCAACGTGGTGCTCGTGCTGCTGGGGGCGCTCGTGCTGAAGAACGTGGCGCAGTACGCCGCCGCGGTCTCGAGCGTCGCGATCGAAGAGGGCGTGGTGCGCGACCTGCGGGTGCGCCTGTTCCGCCACCTCNNNNNNNNNNNGCTCGCTTCGCTGCTCCGCAACGTCAGCCTCATCGTCGTGTACGTCGCGATCCTGCTGGGGCTGTCGTGGCGGCTCACGCTGATCGCGATCGTCGCGGCTCCGGTGCTGGCGCTCATCATCCGGCCGATGATCGCCCGCGTGCGGCGCCGCTCGCGCGAGCAGGCGGACGAGCGCGGCGAGCTGACGAGCCTGGTGGCTGAGATGGTGGCGTCGATCAAGCTGGTACGCGCCTACGTCGCGGAGGCGTTCGAGGCGGAGCGCTTCCAGCGGCTCGCCGACCGCTACCGCCGGCGGGTGCTGCGCGCGCAAGGCTGGTCCACCCTCACGAGCCCCGTGAGCGAGATCTTCGCCGGGCTCGTGATCGTGCTGATCTTCTCCTACGGCACCCACCTCGCCCTCGGCGCCTCGGCCACGCTCCGGCCCGAGGTGTTCATCGCGTTCATCGCCGTGGCGCTGCGACTGATGTCGCCGGTGAAGGCGGTGGCGCAGTACCCCACGATCATGGCGGGCGCGGTGGCCGCGGCCGACCGCGTCTTCGAGGTGCTGGACCTGCCGCCCGACGAGGGCGACCGACCGGGCGAGATCCCCGCAGCCTTCCGGGAGCGGATCGAGTACCGCCGGGTGAGCTTCTCCTACGACGGGACCGAGGCCGCCGTGCTGCGCGACGTGGACCTGGAGGTGCGTCGCGGCCAGGTGGTGGCGATCGTGGGGCCGTCCGGGGCGGGAAAGACCACGCTCGTGGACCTGCTGCCGCGCTTCTACGAGCCCACCAGCGGCGGCATCCTCATCGACGGCGTGCCGATCACGCGGTTCACGCGCGCGAGCGTCCGCGCCCTGATGGGGATCGTGTCGCAGGAGACGGTGCTCCTGAACGACAGCGTGTTCGCGAACGTCGCCTACGGGCGCAGCGACTTCACGCTCGAGCAGGTGCGGGCCGCGGCGCGCGCCGCCAACGCCGACGAGTTCATCGCGCATCTCCCCGAGGGCTACGACACCCTGCTGGGCGAGCGCGGCACCCGGCTCTCGGGCGGGCAACGCCAGCGCATCGCGATCGCGCGCGCCCTGCTGCGCGACCCCCCCCCGGTCCTGATTCTCGACGAGGCGACGAGCGCGCTCGACGCCGAGTCGGAGCGCCTGGTGCAGGAGGCGATCGATCGCCTGATGGCGCACCGCACCGTGCTCGTCATCGCGCACCGGCTTACGACCGTGCGGCACGCGGATCTGATCGTCGTGCTCTCGGAGGGGCGCATCGTGGAGCACGGGACGCACGACGCCCTGTTCGCGGCCGGCGGCGTCTATCGGCGGCTCCACGACATGCAGTTCCGGGTCTGA
PROTEIN sequence
Length: 573
MRRGARLLLLLRPYTLLFVTNIVATLVASVMDGATFVLLIPFLRALFGQQALPATGTSGVEDVLAKIAGPFLAAGAPELALRNVVLVLLGALVLKNVAQYAAAVSSVAIEEGVVRDLRVRLFRHLXXXXLASLLRNVSLIVVYVAILLGLSWRLTLIAIVAAPVLALIIRPMIARVRRRSREQADERGELTSLVAEMVASIKLVRAYVAEAFEAERFQRLADRYRRRVLRAQGWSTLTSPVSEIFAGLVIVLIFSYGTHLALGASATLRPEVFIAFIAVALRLMSPVKAVAQYPTIMAGAVAAADRVFEVLDLPPDEGDRPGEIPAAFRERIEYRRVSFSYDGTEAAVLRDVDLEVRRGQVVAIVGPSGAGKTTLVDLLPRFYEPTSGGILIDGVPITRFTRASVRALMGIVSQETVLLNDSVFANVAYGRSDFTLEQVRAAARAANADEFIAHLPEGYDTLLGERGTRLSGGQRQRIAIARALLRDPPPVLILDEATSALDAESERLVQEAIDRLMAHRTVLVIAHRLTTVRHADLIVVLSEGRIVEHGTHDALFAAGGVYRRLHDMQFRV*