ggKbase home page

13_1_40cm_scaffold_1607_22

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(29010..30272)

Top 3 Functional Annotations

Value Algorithm Source
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 33.7
  • Coverage: 350.0
  • Bit_score: 126
  • Evalue 6.50e-26
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS31184.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 30.0
  • Coverage: 320.0
  • Bit_score: 88
  • Evalue 2.70e-14
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 26.9
  • Coverage: 301.0
  • Bit_score: 87
  • Evalue 1.20e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
CGCCCGAAGAAGACCGGGCTCGCAGGGAAGTCCATCGGATCCGTGGCGCTGCCTGCAAATCGCGCGATGAGCACGCCCTTTCGCGAGAGCACCTGGAGTTCATTCGCCTGGTTGGCGCAGACCCAGAGGTTCCCTCGCGCGTCGAACGTGATGCCATCGGCGCCGTTCAGGGCGTCCGTGGTGCCCATCGCGGTGTTGATAGCCGCGCCGTCCGTTTTCGCCGCCGTGACTCTGGTTCGTTTCCAGGGCACCCAGGACCGCATCTCATTGATTCTCGGCGCCGGGTTTCTTCTGTCGGGCGCCGTTCTGACGGCCACCAGCATTCTCTTTTTTCAGATTTTTCCGGAAGCCCCGCTGCGGATACTCTGGGCGCCCCTTGCTTGGTGGCTTGGCCGTATTGTCCTGGCACTTCTGCTCGTTGTTGCGCTTCTGGTTGAGCATTTCCTGCCGCGTTCGCGTCATCCACGCCGTGAAATTGCCGGCGCTTTGCTGACTGTAGTCGCGGTGACCTACGTGGTATCCGCCGCGCTTCGTCGCTTGCCGCCCGAGGTTTCTCGCCACCCCAGCGCGTTTTTCCCCTATCCCGAGCAATTGCTGCCCGGCGCGATCTTCCTCGTGAGTCTCATCTGGTTCCGCCGGCGTTTGTCCGTAGAGGATTCCGCCTTCGACCGCACCATTTACGCAGCCACCTGGTTGAATCTCGCAGCGCAGCTTTCGGCCGCTCAATCCACCCGCTTGCTGGATGCTCCGTTCGTTTTCGCGCAAGCGCTCATGGTGTTGGGCTACACCGTCGCCCTCTGCGGGGCTCTTCTCGACAATGCGCGGCTCTTCGAACAGGTGCGTCATCTCGCCGTCAGCGATCCGCTCACCGGGCTTGCTAACTATCGCCGCCTGCTCGATGTTCTTGAAAGCGAGACCGATCGCACCGATCGCAACGGCCGGCCCTTTTCCGTTTTGCTTCTTGATCTCGATGGCCTGAAAAAAATCAACGATAACTTTGGCCACCTCGTCGGGAGCCGCGCCATCTGCCGTCTCAATTTGCGCTCGTTCTCCCGGAGTCGCAGGAGGACGAAGCGCGGCGCGTCGCCAATCGCATCCGGGAAGTTCTCGCAAGCGACACGGAACAGCCGGCCCTCTCCGCGAGCATCGGCATCTCTACGTACCGTGGCGACGGCGAGCGCATTGAGAAATTGCTCTCGGAAGCGGACCACGATCTATATGCGGAAAAGGCTCGGCGTGTTAGACGTGCTGCTGCTGCGCTAA
PROTEIN sequence
Length: 421
RPKKTGLAGKSIGSVALPANRAMSTPFRESTWSSFAWLAQTQRFPRASNVMPSAPFRASVVPIAVLIAAPSVFAAVTLVRFQGTQDRISLILGAGFLLSGAVLTATSILFFQIFPEAPLRILWAPLAWWLGRIVLALLLVVALLVEHFLPRSRHPRREIAGALLTVVAVTYVVSAALRRLPPEVSRHPSAFFPYPEQLLPGAIFLVSLIWFRRRLSVEDSAFDRTIYAATWLNLAAQLSAAQSTRLLDAPFVFAQALMVLGYTVALCGALLDNARLFEQVRHLAVSDPLTGLANYRRLLDVLESETDRTDRNGRPFSVLLLDLDGLKKINDNFGHLVGSRAICRLNLRSFSRSRRRTKRGASPIASGKFSQATRNSRPSPRASASLRTVATASALRNCSRKRTTIYMRKRLGVLDVLLLR*