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13_1_40cm_scaffold_178463_3

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(974..1204)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 64.0
  • Bit_score: 91
  • Evalue 7.60e-16
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 67.0
  • Bit_score: 90
  • Evalue 9.40e-16
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 75.0
  • Bit_score: 70
  • Evalue 2.10e-10

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 231
TCCCGCCAGACCGAACTGCGTATGGCGCTGACCGCGGCGATCCACGAGTTGCCGCCGCACTACCGCACCGTCCTCATCTTGCACGATGTCGAAGGTCTCTCGCATATCGAAGCGGCGGAGTCCCTGGGTCTCAGCGTCCCCAACGTGAAGTCACGCGTGCACCGCGCCCGGCTGTTTCTCCGGAAGCGACTGGCCGACGTCCACGGAGGCCTGCGAGGCGCTGCAGGGTAA
PROTEIN sequence
Length: 77
SRQTELRMALTAAIHELPPHYRTVLILHDVEGLSHIEAAESLGLSVPNVKSRVHRARLFLRKRLADVHGGLRGAAG*