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13_1_40cm_scaffold_1858_16

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(15577..16956)

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 448.0
  • Bit_score: 683
  • Evalue 1.60e-193
Two component system response regulator, sigma54-specific id=4571215 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 455.0
  • Bit_score: 635
  • Evalue 4.70e-179
two component system response regulator, sigma54-specific similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 445.0
  • Bit_score: 431
  • Evalue 3.80e-118

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGGCGCGGCGGCCTGCGGTTCTCGTCGTCGACGACGACCCCGGTATCCGGGAATCGTTTCGGCTGATCCTCGAGGACCACTACGACGTCGTCGACGTTCCGGACGGCCCCAGCGCGCTCGATGTCGTCCATGCCTCCCAGGTGGACCTCGTGCTGCTCGACATCCGATTGACCGGGATGGACGGAATCGAAGTGCTCGAGCGCATCAAGGCCATCGACGAAGGGATCGAGGTGATCCTCGTCACGGCCGTGAAGACGGTGCGGACGGCGGTGGCGGCCATGAAGCTCGGGGCCTTCGACTACCTGACCAAGCCCTTCGAGGAGGACGAGCTCCTGTCCCTCTCGCGCCGGGCGCTCGAACGGCGGGCGCTCGAGCGAGAGGTCGCGTTCCTCCGCTCCGAGCTGGCCCGGACGCACGATCTCGACGAGATCGTCGGCCAGCACCCCGCGATGGAGAAGCTCCACGGGCTCATCGCGCAGGTCGCGCGCACGTCTACGACGGTGCTCATCACCGGCGAGAGCGGCACCGGCAAAGAGCTCGTCGCGCGGGCCATCCATCGCCAGGGGGCGCGGCGCGAGGCGCCTTTCGTCGCCGTCAATCCGGCGGCCATCGCCGAATCACTCATCGAGTCCGAGCTCTTCGGCCATGAGAAGGGCGCGTTCACCGGCGCCCATCAGAGAAAGCTTGGTAAGTTCGAGCTGGCGCAGGGAGGCACCTTCTTTCTCGACGAGATCGGCACGCTCCGCGCCGAGCTCCAGGCGAAGCTCCTGCGGGTGCTCCAGGAGCGCGAGATCGAGCGGGTAGGCGGCATGCGGCCGGTGAAGATCGACGTCCGGTTCATCGCCGCGACCAACTCCAACCTCAAAGAGGCCGTGGGCCACGGCGCCTTTCGCGAGGACCTCTATTACCGGCTCAACGTCGTCCACGTGGTGGTCCCGCCGCTGCGCGAGCGCATCCAGGATGTACCCGTGCTCGTCGACCATTTTGTCCGGCGCCACAACCGTCGGTTCAACAAGCGTCTCGGAGGGCTCTCGCCCGAGGCGCTCGCGGCGCTGCAAGCGTATCGGTGGCCGGGGAATGTGCGCGAGCTCGAGAACGTCATCGAGCGGTGCGTGGTGTTGGCCGAGGGGCCTGTCATCCAGCTCAACGATCTTCCGCTGGACGTGCTGCTGCCTCAGCAGGCCACGAAGGTCCGGGCGGCCGAGGCCCTCCCGCTCAACGAGGCGACGGATCAGTTCGAGCGCCAGATCGTGCTGCGAGTGCTCGAGCGAGTGGGGTGGAATCTCACCGAGGCCGGACGGATTCTCGCGATCCATCGCAACTCGCTCCGCGTGAAGCTCGCACGCTGGGCTGTTCGAGCGCCGGGCGGCGAGCGCTGA
PROTEIN sequence
Length: 460
MARRPAVLVVDDDPGIRESFRLILEDHYDVVDVPDGPSALDVVHASQVDLVLLDIRLTGMDGIEVLERIKAIDEGIEVILVTAVKTVRTAVAAMKLGAFDYLTKPFEEDELLSLSRRALERRALEREVAFLRSELARTHDLDEIVGQHPAMEKLHGLIAQVARTSTTVLITGESGTGKELVARAIHRQGARREAPFVAVNPAAIAESLIESELFGHEKGAFTGAHQRKLGKFELAQGGTFFLDEIGTLRAELQAKLLRVLQEREIERVGGMRPVKIDVRFIAATNSNLKEAVGHGAFREDLYYRLNVVHVVVPPLRERIQDVPVLVDHFVRRHNRRFNKRLGGLSPEALAALQAYRWPGNVRELENVIERCVVLAEGPVIQLNDLPLDVLLPQQATKVRAAEALPLNEATDQFERQIVLRVLERVGWNLTEAGRILAIHRNSLRVKLARWAVRAPGGER*