ggKbase home page

13_1_40cm_scaffold_198032_1

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(37..1122)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 361.0
  • Bit_score: 352
  • Evalue 3.60e-94
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 357.0
  • Bit_score: 459
  • Evalue 5.10e-126
SecD export membrane protein similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 364.0
  • Bit_score: 384
  • Evalue 2.40e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1086
AAGCAGCAGCCCGACACGGCCGGCCTCAATGCGCCGGGACCCCTGTCCTCGCTGCTCTATCAAGGCGCGCTCCCGGGCGAATACCTCGTCCCCGTGGAGCAGGTGCCGGTGGCCGAGAGTCTGCTCGCGCGGCCCGAGGTGCAGCGGCTGGTACCGCGCGGCATCGAGCTCAAGTGGGGCACGGAGGACCTCTCGCGCGGCGCGCGCTCGTTCCAGACGCTGTACGCGGTCGAGGACCGACCCATCATCACGGGGGACGAGCTCGAGAAGGCGACCGCGCGGCGCGATCAGCTCACGAACCAGTCGGTGGTGGACTTCGTGCTCTCCCGGCGCGGCGGCCGCACGTTCGAGCGTGAGACGGGCCGGCACGTGAACGACTACATGGCGATCATCCTGGACGGGCGCGTGCAGCGACAGCCGCCGATCATCAAGAGCCAGATCGGCCAGCGGGGCCAGATCGAGCTGGGCGCGAAGGCGCTGCAGGAAGCCCAGGACCTGGCGCTGGTGCTGCGGGCGGGTGCCCTTCCCGCGCCGCTCACGATCGTGGAGGAGCGGACCATCGGCCCGTCACTCGGGCGGGACTCGATCGCGGACGGTATCCGGGCGGGCATCGTGGGCGTGGCGCTCGTCGTCCTGATCATGGTGATCTACTACCGCCTGTCCGGGGCGCTCGCGGTGGCGGCGCTGACCTTCTACGTGCTGCTGACGCTCGGGGGCCTCGCCGCCTTCGGCTTCACGCTGACGCTGCCGGGGCTCGCCGGGCTCGTCCTGTCGGTGGGCATCGCCGTGGACGCGAACGTGCTGATCTTCGAGCGCATCCGCGAGGAGCTGCAGCACGGCAAGCTGATCCGCACGGCCGTGGACGAGGGCTTCAAGCATGCGATGAGCGCCATCATCGACTCCAACGTGAGCACGGCGCTCACGGCGGCGATCCTCTACCTCGTCGGGACGGGCCCGGTGCAGGGCTTCGCGATCACGCTCATCATCGGCATCATCGCCTCCATGTTCACGGCCGTCTTCCTCGTGCGCACCTTCTACATGATCTGGCTGCAGCGGCGGCCGGACATGGCCACCCTGAGCGTCTGA
PROTEIN sequence
Length: 362
KQQPDTAGLNAPGPLSSLLYQGALPGEYLVPVEQVPVAESLLARPEVQRLVPRGIELKWGTEDLSRGARSFQTLYAVEDRPIITGDELEKATARRDQLTNQSVVDFVLSRRGGRTFERETGRHVNDYMAIILDGRVQRQPPIIKSQIGQRGQIELGAKALQEAQDLALVLRAGALPAPLTIVEERTIGPSLGRDSIADGIRAGIVGVALVVLIMVIYYRLSGALAVAALTFYVLLTLGGLAAFGFTLTLPGLAGLVLSVGIAVDANVLIFERIREELQHGKLIRTAVDEGFKHAMSAIIDSNVSTALTAAILYLVGTGPVQGFAITLIIGIIASMFTAVFLVRTFYMIWLQRRPDMATLSV*