ggKbase home page

13_1_40cm_scaffold_2022_13

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 10610..11947

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterin similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 465.0
  • Bit_score: 325
  • Evalue 1.40e-85
RNA-splicing ligase RtcB n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MTG5_CORCM similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 465.0
  • Bit_score: 325
  • Evalue 1.00e-85
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 465.0
  • Bit_score: 325
  • Evalue 2.80e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Corallococcus coralloides → Corallococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
ATGCCGACGTTGCGAGAGATCGGAACAAACCACTACCGGGTTCCCGGAGACGTACCGATTGACGTCTTCGCCAACGAACCGATCCTGCGCACCTTCGACGACGCTGTCTTCCAGCAGGCAGCGAACACGGCCGCCATTCCTGGTGTCGAGTCGGTGGTGCTGATGCCCGACGCCCACTCGGGATATGGAGCGCCGATCGGCGCCGTGGTGGCAACCAAAAACACGCTGATCCCGATGGTGGCCGGCTACGACATCTCCTGCGGGATGAGCTTCTTGCAGAGCAGCCTGACCATCGAGCAGCTGGCTGACTGGCGGATCCGTCGGGGCGTCATTCAGGCGATCGAGCGGCGCGTCGCGCTCGGCCGTGACAAGGCCGTAATCCCGGTGACGAGAGACCGCTTCGAGCGCATCCTTCGAGAAGGGGCGCAGGGGTATCCGGCCGATATCCGCGACCGCCTCGAGCGTGTCAATTTCGGTTCGCAGGCGCAGCTCAGTGCCCGCGCCCGCCAGCGGGGGATCGAGACGGTGGGGAGCGTCGGCAGTGGGAATCACTTCATTGAGGTACAGGCCATCGCGGTGCACCGGCCCGAGCTTGCGCAAACGTTTGGCGTGCGAAACGGGGTCGGCGTGATGATTCACACCGGCAGTCGCGGGCTCGGCCACCAGGTGGCGAGCGAATTTCTGCAAGAGCTCCAGGCACAAGGTTGGCAGCAGCCGGCCGACCGAGAACTCGTCTTCATGCCGGCCGACTCTGACGTCGGACGGCGATACCTCGACGCCATGGGCGCCGCGGCCAATATCGCCATCGTCAACCGGCTCCTCCTCCTGGCGCAGGTTGCAGAGGTGCTCGAGGAGCAGTTCGGTGCCACGACTCAGGTCGTCTACGACATCTCCCACAACCTCATCCAGCAGGAGGACCTTGATGGAGAACCTCACTGGATTCACCGGAAGGGCGCGACCCGCGCCTTTCCCGCGGGACATTCGGGGCTGCCTCGGCGCTGGCAGAAGTCCGGGCATCCGATCATCACGCCCGGCTCGATGGGAACGAGCAGCCACATCCAGGTCGCGCAAACCGGCGCGCGCGCCAGTCTCTATTCGATCAACCATGGCGCCGGTCGGGTGCTGTCGCGGCGGGCTGCCAATCGCGATCTCAAGCAGGTGGACGCCGATCGCTGGTTAGCGGAGCGAGACATTCTGATCAACACGCGTCACGTGCCGCTCGATGAGAGCGCCGCGGCCTACAAGGACATCGACCAGGTGATCGATAGCATTGCCGGTGCCGGCCTGGCGCAGGTGGTTGCCAGTTGCCGTCCCATGGCCGTGATCAAAGGGGCGTGA
PROTEIN sequence
Length: 446
MPTLREIGTNHYRVPGDVPIDVFANEPILRTFDDAVFQQAANTAAIPGVESVVLMPDAHSGYGAPIGAVVATKNTLIPMVAGYDISCGMSFLQSSLTIEQLADWRIRRGVIQAIERRVALGRDKAVIPVTRDRFERILREGAQGYPADIRDRLERVNFGSQAQLSARARQRGIETVGSVGSGNHFIEVQAIAVHRPELAQTFGVRNGVGVMIHTGSRGLGHQVASEFLQELQAQGWQQPADRELVFMPADSDVGRRYLDAMGAAANIAIVNRLLLLAQVAEVLEEQFGATTQVVYDISHNLIQQEDLDGEPHWIHRKGATRAFPAGHSGLPRRWQKSGHPIITPGSMGTSSHIQVAQTGARASLYSINHGAGRVLSRRAANRDLKQVDADRWLAERDILINTRHVPLDESAAAYKDIDQVIDSIAGAGLAQVVASCRPMAVIKGA*