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13_1_40cm_scaffold_221643_2

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 82..1242

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 316.0
  • Bit_score: 336
  • Evalue 6.90e-89
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 334.0
  • Bit_score: 280
  • Evalue 6.90e-73
Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A885_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 334.0
  • Bit_score: 280
  • Evalue 2.50e-72

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1161
GTGACGGCGGCCACCGTCGCTTTCTGCGTCGTCGCCGCCCAGACCGAGCGTCTCGACCGCTTCCTCGCCGATCAGCTTGCCCTGTCGCGCACGGTCGCGGCCCGGCTCGTGGCCGCCAAGTGCGTCAGCGCGGGCGGGCGGCCGCTGCGCGCCTCCGCGCGGCTGGAGCGCGGCGCCGTCGTCACGGTCACGCTCCCACCCGACGCACCGCCCCCCAGGACCTATGCCCCCGCTCACCAGACGCTGACCTTCGTGTTCGAAGACGAGCACCTCGCCGTGCTCGACAAGCCGCCGGGCCTCGTCATCCACCCGGGGCCGGGTCACTGGGACGACACGCTGGTGAACGTGCTGGTGGGGCGGGGCACGCCGCTCGCGCCGGGGGCCGAGGGCCGGCCCGGCATCGTGCACCGTCTCGACCGCGACACGTCGGGCTTGCTCCTCGTCGCGAAGACGGAGGCGGCGCACCGCCGCCTCGCCACCATGATCGAGCAGCGGCGCGTCGAGCGCATCTACGCCGCGGTCGCCTGGGGCCACCTCGCGAAGAGCCCGGTCACGATCGAGGCGCCGATCACCCGCCACCCCCAGGACCGCAAGCGCATGACCGTGCTCGCGGGAGGGCGGCACGCCGTGACGCACGCCGCCGTCGTCGCGCGCTTCGCGCAGGTCGATCTCTTGCGCGTCCGCCTCGGCACGGGGCGCACGCACCAGGTCCGCGTGCATCTCGCGCACGTGGGCCATCCCGTCGTGGGGGATCGCGAGTACGCGTTCGGGGGCAGCCGGCGCGTCACGCCGTCCGAGCGCCGCGCCGCTGAGCGCCTCGAGGCGCTCGCTCCGCGGCAGCTGTTGCACGCGGCGGCGCTCGGCTTCGACCATCCCGTGACCGGTGCGCGGCTCGCGCTGCGATCCGAATGGCCCGGCGATCTCGCGCCGGCGCTCGCGCAAGCGGCGGCCGCCGAGCGCCTCGAGACGCTCGCTCCGCGGCAGCTGCTGCACGCGGCGGCACTCGCCTTCGACCATCCCGTGACGGGTGCGCGCCTCGCGCTGCGATCCGAATGGCCCGCCGATCTCGTGCCGGCGCTCGCGGAAGCGGCCGCCGATCCGAGTTTGCTTGCTCAACGCAACCCGTTGCAGTATCTTGGCTTCTTCGCATCGGATGAGTGA
PROTEIN sequence
Length: 387
VTAATVAFCVVAAQTERLDRFLADQLALSRTVAARLVAAKCVSAGGRPLRASARLERGAVVTVTLPPDAPPPRTYAPAHQTLTFVFEDEHLAVLDKPPGLVIHPGPGHWDDTLVNVLVGRGTPLAPGAEGRPGIVHRLDRDTSGLLLVAKTEAAHRRLATMIEQRRVERIYAAVAWGHLAKSPVTIEAPITRHPQDRKRMTVLAGGRHAVTHAAVVARFAQVDLLRVRLGTGRTHQVRVHLAHVGHPVVGDREYAFGGSRRVTPSERRAAERLEALAPRQLLHAAALGFDHPVTGARLALRSEWPGDLAPALAQAAAAERLETLAPRQLLHAAALAFDHPVTGARLALRSEWPADLVPALAEAAADPSLLAQRNPLQYLGFFASDE*