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13_1_40cm_scaffold_2268_20

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 18147..18758

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 203.0
  • Bit_score: 334
  • Evalue 1.10e-88
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 198.0
  • Bit_score: 285
  • Evalue 5.30e-74
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 190.0
  • Bit_score: 150
  • Evalue 5.70e-34

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGACTGTCATGGACAGGTCGAAATCCGACGGCGACGCGGCCCTGGTCGAGGCGCTGCGGCGCGAGGACCCGGAAGCTCCAGAGCAGTTGGTGGAGACCTATGGCGACCGCGTGTATCGGCTCGCATTGCGCATCACGGGGTCGAACGAGGACGCGGAGGAGGCGGCCCAGGACGCCCTCTGGACGGCTGCCCGGAAGATCTCCACCTTCAAGGGCGAGTCCGCCTTCGGCAGCTGGCTCTATCGCATCGCCGCGAACGCGGCGTATCAGAAGCTGCGAGCTCGTCGTCCTTCGAAGACGCACGAGATCGCGATCGACGAGGTGCTGCCGGCGTTTGACGACGACGGTCGGCACTTCGAGCCGATGGCCGACTGGTCCGATCGAGTGGACGAGCAGGCCCTCCAGGGCGAGCTGCGACGTGTGCTGGGCTCCGCCATCGACGGGCTCCCGCCCGACTACCGGACCGCGCTCGTCCTCCACGACGTGGAGGGCCTGTCGAACCCGGACATTGCGGAGGCGCTCGGCATCAGCCTGCCGGCGGTGAAATCCCGGGTGCATCGCTCCCGCCTTTTCGTGCGTAAGCAGCTCGCCGACTACATGAAGACCGCGTGA
PROTEIN sequence
Length: 204
MTVMDRSKSDGDAALVEALRREDPEAPEQLVETYGDRVYRLALRITGSNEDAEEAAQDALWTAARKISTFKGESAFGSWLYRIAANAAYQKLRARRPSKTHEIAIDEVLPAFDDDGRHFEPMADWSDRVDEQALQGELRRVLGSAIDGLPPDYRTALVLHDVEGLSNPDIAEALGISLPAVKSRVHRSRLFVRKQLADYMKTA*