ggKbase home page

13_1_40cm_scaffold_4867_16

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 15329..15715

Top 3 Functional Annotations

Value Algorithm Source
ompR; response regulator receiver Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 125.0
  • Bit_score: 163
  • Evalue 2.70e-37
Two component transcriptional regulator, winged helix family id=3299511 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 125.0
  • Bit_score: 162
  • Evalue 2.50e-37
response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 117.0
  • Bit_score: 109
  • Evalue 9.20e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 387
GTGCTTACGGTGTTGATCGTCGACGATGAGCCGAACGTGGTCGACCTCGTTCGGGTGACGCTCGAAGACGAGCGGGTCCGCGTCCTCGACGCCCCCGACGCGGCCCACGCGTTCGAGGCCCTGTCAGCCCTTCAGCCTGACCTGGTCCTGCTCGACGTCAACTTGCCTGACCTGAGTGGCTTCGACATCTGCCGCTGGATTCGTCACGACGCCGTCCTGGCACGGACGAAGGTCGTCATGCTCACGGCCGCCGCTCAGAAAGAAGACGTCGCACGGGGCCACGCTGCCGGCGCGGACCACTACCTCACCAAGCCGTTCTCTCCGGTACGGTTGTTGTCGTTGGTGGAGGAGTTACTCCCGCATTCAGTCCTGTGGGCGCGCAGGTAG
PROTEIN sequence
Length: 129
VLTVLIVDDEPNVVDLVRVTLEDERVRVLDAPDAAHAFEALSALQPDLVLLDVNLPDLSGFDICRWIRHDAVLARTKVVMLTAAAQKEDVARGHAAGADHYLTKPFSPVRLLSLVEELLPHSVLWARR*