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13_1_20cm_4_scaffold_27039_3

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: comp(3612..4232)

Top 3 Functional Annotations

Value Algorithm Source
rpfC; two-component system sensor-response regulator hybrid protein RpfC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 203.0
  • Bit_score: 280
  • Evalue 1.40e-72
Sigma-54 factor interaction domain-containing protein id=2883274 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 200.0
  • Bit_score: 175
  • Evalue 6.00e-41
two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 105.0
  • Bit_score: 68
  • Evalue 2.20e-09

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 621
CCGCTGGTCGTCCGCAGCGCCGAAGCCGCGCTCGGCAAGCTCCAGACCGAGCGCCCCGACGCGATCATCCTCGACGTCCACCTGCCCGGCATGAGCGGAATCGACTTCCTCCAGCTCCGCCCCGTGCGGGAGCTCGGCGTGCCGATCGTCGCCGTCTCGGGCGTCGCGACCGAGAGCCAGGCGCGCGAGTGCCTGCGCCTGGGCGCGACCGATTTCATGGGCAAGCCCATCCCGCTCGACCGCCTCGGCGAGGTCCTCTCCGTCATCGAGCCGCACGCGCTGAGCCGCCTCGAGGAGTCCTGGCGGCACGACGACCGACGCGCCTCGTCGCGGGCACACCTCTCCCTGCCGATCCACGTCCTCGAGTACGGCGGCGCCGAGCACCGCGGCACGACCGTGGAGCTCGGGGTGGAAGGCCTGAAGGCGCGTCTGGACGCGTCGCTCACGCCGCGCAGCGTGGTGAGGCTCTCGTTCACGCCGCCCGACGCGGGCTCCGCGATCACCGTCATGTCGCGGGTGATCCGCGCGGATCCCGATGGGCACGCGTTCGCCTTCGTCCACCTGCCCGAGGCCGACACCGAGCGCCTCCGCGACCTGATCCGGCGCCGCCCGTCCCGCTGA
PROTEIN sequence
Length: 207
PLVVRSAEAALGKLQTERPDAIILDVHLPGMSGIDFLQLRPVRELGVPIVAVSGVATESQARECLRLGATDFMGKPIPLDRLGEVLSVIEPHALSRLEESWRHDDRRASSRAHLSLPIHVLEYGGAEHRGTTVELGVEGLKARLDASLTPRSVVRLSFTPPDAGSAITVMSRVIRADPDGHAFAFVHLPEADTERLRDLIRRRPSR*