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13_1_20cm_4_scaffold_28743_5

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: comp(4513..4929)

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 140.0
  • Bit_score: 227
  • Evalue 1.20e-56
Lipopolysaccharide transport periplasmic protein LptA id=4810649 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 137.0
  • Bit_score: 199
  • Evalue 2.60e-48
OstA-like protein similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 131.0
  • Bit_score: 99
  • Evalue 6.00e-19

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGGAGCGGTTGGGCAAGGAGAGCCTCGTCATCTTCACCGGTAACGTCGTCGCCCGGCAGAACAACTCGGTCCAGTACGCGGACCGGATGGAGGTCTACCTCGACGAGAAGGGCGACCGCGTGCTCCGCACCGTCTCGACGGGCGGCGTCCGCGTCATCACGCGCGACTGCCGCACCGCCACGGCCAAGCGCGCCGAGTACTTCGACCTCGAGCAGCGCGTGGTCCTGCTCGGCAACGCCCGCGTCTGGCAGGACGACAACGTCGTGAGCGGCGACACCATCACGATCGACCTCTCGCAGGACCGCTCGGTGGTGCAGGGCGGGACCCAGGAACGCGTGAAGGCCGTCTTCTATCCCCGCGAAGAGGGCAAGAAGCACGACCAAGGGCGCAAGCCCGGCGAGCCGTGCGCCAACTGA
PROTEIN sequence
Length: 139
MERLGKESLVIFTGNVVARQNNSVQYADRMEVYLDEKGDRVLRTVSTGGVRVITRDCRTATAKRAEYFDLEQRVVLLGNARVWQDDNVVSGDTITIDLSQDRSVVQGGTQERVKAVFYPREEGKKHDQGRKPGEPCAN*