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13_1_20cm_4_scaffold_82019_3

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: comp(964..1644)

Top 3 Functional Annotations

Value Algorithm Source
ymdA; 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16); K06950 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 226.0
  • Bit_score: 417
  • Evalue 1.10e-113
Ribonuclease Y id=3975867 bin=GWA2_Methylomirabilis_73_35 species=Phascolarctobacterium succinatutens genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 227.0
  • Bit_score: 409
  • Evalue 2.10e-111
phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 226.0
  • Bit_score: 294
  • Evalue 2.70e-77

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGGACGTTCACCTCAAGGAAGAGGGCGACAAGGCGTGCTTCGAGGTCGGCGTGCACGGCCTGCATCCCGAGCTGGTCAAGCTCGTGGGCCGGCTGAAGTACCGGACCTCCTACGGCCAGAACTGCCTGCAGCACTCCAAGGAGGTCTCCTGGCTGGCCGGCATGATGGCGGCGGAGATCGGCGCCGACGTCAAGCTGGCCAAGCGCATGGGGCTGCTGCACGACATCGGCAAGGCGCTCACCCACGAGCAGGAGGGCAGCCATCCCGAGCTCTCGCTCCAGGTGCTCACCAAGTACAGCGAGAGCCCCAAGGTGATCAACGCCGCGCTCTGCGGCCACGAGGACGTGAAGGCGGAGACGGTGGAGGCGGTGCTCACCGAGGCCGCCGACGGCATCTCGGCGGCGCGGCCCGGCGCGCGGCGCGACGTGCTCGAGTCCTACATCAAGCGGCTGGCCCAGCTGGAGGAGATCGCGCTGTCCTACAAGGGCGTCGACATGTGCTACGCGATCCAGGCCGGCCGCGAGCTGCGCGTGATGACGCGCGCCGACGTCGTCTCCGACCTCGACGCGCACCAGCTCGCGAAGGACATCTCCAAGCGCATCGAAGCCGAGATGCAGTACCCCGGCCACATCAAGGTGGTGGTGATCCGCGAGACGCGCGCGGTCGAGGTGGCCAAATAG
PROTEIN sequence
Length: 227
MDVHLKEEGDKACFEVGVHGLHPELVKLVGRLKYRTSYGQNCLQHSKEVSWLAGMMAAEIGADVKLAKRMGLLHDIGKALTHEQEGSHPELSLQVLTKYSESPKVINAALCGHEDVKAETVEAVLTEAADGISAARPGARRDVLESYIKRLAQLEEIALSYKGVDMCYAIQAGRELRVMTRADVVSDLDAHQLAKDISKRIEAEMQYPGHIKVVVIRETRAVEVAK*