ggKbase home page

13_1_20cm_4_scaffold_86833_2

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: 197..613

Top 3 Functional Annotations

Value Algorithm Source
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 138.0
  • Bit_score: 262
  • Evalue 2.70e-67
50S ribosomal protein L16 id=4716775 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 139.0
  • Bit_score: 240
  • Evalue 1.30e-60
rplP; 50S ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 134.0
  • Bit_score: 215
  • Evalue 1.30e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 417
GTGCTGATGCCCAAGCGCGTCAAGTACCGGAAGGCCCAGCGGGGGCGGATGAAGGGGACCGCGCAGCGTGGCGCGACGCTCGCGTTCGGCGCGTATGGACTGAAGGCGCTCGAGCCGGGCTGGGTGACGAACCGGCAGATCGAGGCGGCGCGCGTCGCGCTCTCGCGGAGCCTCAAGCGCGGCGGCAAGATCTGGATCCGGATCTTCCCCGACAAGCCCGTGACGAAGAAGCCGGCCGAGACCCGGATGGGCAAGGGCAAGGGCAACCCGGAGGAGTGGGTGGCCGTCGTGAAACCCGGGCGGATCATCTACGAGATGCAGGGCGTGCCGGAGGACGTGGCGCGCGAGGCGTTCCGGACGGCCGCGCAGAAGATGGGCATCGCGACGAAGTTCGTGATGCGCACCCGGACGCTCTGA
PROTEIN sequence
Length: 139
VLMPKRVKYRKAQRGRMKGTAQRGATLAFGAYGLKALEPGWVTNRQIEAARVALSRSLKRGGKIWIRIFPDKPVTKKPAETRMGKGKGNPEEWVAVVKPGRIIYEMQGVPEDVAREAFRTAAQKMGIATKFVMRTRTL*