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SCNpilot_BF_INOC_scaffold_10556_1

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 1..1032

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=653930 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 344.0
  • Bit_score: 651
  • Evalue 8.60e-184
transcription termination factor Rho n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D8F3AB similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 344.0
  • Bit_score: 651
  • Evalue 6.20e-184
rho; transcription termination factor rho similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 344.0
  • Bit_score: 650
  • Evalue 2.30e-184

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
GGCCCGGACGACATCTACATCTCGCCCTCGCAGATCCGGCGCTTCTCGCTCAAGACCGGCGACACGGTTGAAGGGCCGATCCGCAGCCCGAAGGAGGGCGAGCGCTATTTCGCGCTGCTCAAGGTCAACACCATCAATTTCGACGACCCGGAAAAGATCCGGCACAAGATCCATTTCGACAATCTGACGCCGCTCTATCCGAACGAGCGGCTGAAGATGGAGACCGAGACGCCGACCAAGGACCTGTCGGCGCGTGTCATCGACCTGGTGGCGCCGCTGGGCAAGGGCCAGCGCGGGCTGATCGTGGCGCCGCCGCGCACCGGCAAGACGGTGCTGCTGCAGAACATCGCCCATTCGATCACCGCCAACCATCCCGAATGCTACCTCATCGTGCTCTTGATCGATGAGCGGCTCGAGGAAGTGACCGACATGCAGCGCTCGGTGAAGGGCGAGGTGGTTTCGTCCACCTTCGACGAACCGGCCGCCCGCCACGTGCAGGTGGCCGAGATGGTGATCGAGAAGGCCAAGCGCCTGGTCGAGCACGGTCGCGACGTGGTCATCCTGCTCGATTCCATCACCCGCCTCGGCCGCGCCTACAACACCGTGGTGCCGTCTTCCGGCAAGGTGCTGACCGGCGGCGTCGACGCCAACGCCCTGCAGCGGCCGAAGCGCTTCTTCGGCGCCGCGCGCAACATCGAGGAAGGCGGCTCGCTGACCATCATCGCCACGGCGCTGATCGACACCGGCAGCCGCATGGACGAGGTGATCTTCGAGGAGTTCAAGGGCACCGGCAACTCCGAGATCGTGCTCGACCGCAAGGTGGCGGACAAGCGCATCTACCCGGCCATGGATATCCTCAAGTCCGGCACCCGCAAGGAGGACCTGTTGGTGCCGCGCGCCGACCTGCAGAAGATCTTCGTGCTGCGCCGCATCCTGGCGCCGATGGGCACGACGGACGCGATCGAGTTCCTCATCGACAAGCTGAAGCAGACCAAGACCAACGCCGACTTCTTCGATTCCATGAACACCTGA
PROTEIN sequence
Length: 344
GPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVNTINFDDPEKIRHKIHFDNLTPLYPNERLKMETETPTKDLSARVIDLVAPLGKGQRGLIVAPPRTGKTVLLQNIAHSITANHPECYLIVLLIDERLEEVTDMQRSVKGEVVSSTFDEPAARHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIYPAMDILKSGTRKEDLLVPRADLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNADFFDSMNT*