ggKbase home page

SCNpilot_BF_INOC_scaffold_12946_1

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(3..908)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system Vgr family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0T0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 302.0
  • Bit_score: 462
  • Evalue 3.60e-127
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:EIL93071.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 302.0
  • Bit_score: 462
  • Evalue 5.00e-127
type IV secretion protein Rhs similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 303.0
  • Bit_score: 331
  • Evalue 2.10e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGCCGCATCAAATGACACTGAAGTCAGATCTCGGTGACAAGCTGCAACCAGCCAGCTTTTCCGGCAGCGAACAACTGGGGCAGCTGTTTTCGTACAACCTCAAAGTACTCAGCAAGGATGGCGAAGTTGCGCTGCTGCCGTTGCTGGGCAGCTCGATGACGGTCACGTTCGACACCGGCGACTACACCCGGCATTTCAACGGCATCGTGGCGGAGATTTCGCAGACGGGGTTCGAGAGCTTTTCCGGCAAGCGCCAGGCGGAGTACGCGTTGACCCTGGTGCCGAAGCCCTGGTTGCTGCTGCACAAGATCGATTGCCGCATCTATCTCAAGAAGTCCGTGCCGACGATCGTCAAGGACGTGCTCGCCGAAATCGGCTACAGCGACGTCAAGCTGAGCCTGAGTGGCGACTACCCGGAGCGCGATTACTGCGTGCAGTACCGCGAGAGCTACTTCAACTTCATCAGCCGACTGATGGAGCAGGAGGGCATCTACTATTTCTTCCAGCACCGTGATGGCGTGCACACGATGGTGCTGGCCGATTCGCTCGGTGCGCACGGAGCCACCGGCGGCTTCGACGAATTGCCGTATCGGCCGCAGACCGGCACCAGCAAGGCGTCAAGCGAGCCGGCGATCACCGAGTTCAGCACCGCGCGTTCGGTGCAGACGATCAAGTATTCGCTGACCGACTACGACCCGCTGGACCCGAAGAAGTCGCTGCTGGGGTTCGAGTCGATCAGCAACGCCGACGGCAACCATCGGGTGCCCAAGCTCGATTCGTTCGACTACCCCGGCGACCACCTGACCGCCGCCGCCGGCAAGCATTACGCGCAGGTGCGGCTGGAGGCGATCAACGTCGCGCAGTCGCTTTGCACCGGCGCGACCAACGTCTGCGGCGTGCTGACC
PROTEIN sequence
Length: 302
MPHQMTLKSDLGDKLQPASFSGSEQLGQLFSYNLKVLSKDGEVALLPLLGSSMTVTFDTGDYTRHFNGIVAEISQTGFESFSGKRQAEYALTLVPKPWLLLHKIDCRIYLKKSVPTIVKDVLAEIGYSDVKLSLSGDYPERDYCVQYRESYFNFISRLMEQEGIYYFFQHRDGVHTMVLADSLGAHGATGGFDELPYRPQTGTSKASSEPAITEFSTARSVQTIKYSLTDYDPLDPKKSLLGFESISNADGNHRVPKLDSFDYPGDHLTAAAGKHYAQVRLEAINVAQSLCTGATNVCGVLT