ggKbase home page

SCNpilot_BF_INOC_scaffold_19908_1

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(3..620)

Top 3 Functional Annotations

Value Algorithm Source
Putative O-antigen polymerase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V2G6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 176.0
  • Bit_score: 174
  • Evalue 1.30e-40
Putative O-antigen polymerase {ECO:0000313|EMBL:EGD40543.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 176.0
  • Bit_score: 174
  • Evalue 1.90e-40
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 176.0
  • Bit_score: 126
  • Evalue 1.20e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nocardioidaceae bacterium Broad-1 → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGACGGCCTGGTACACCTGCGCGACATCGACACGATCCTCCGGCGCTTCAGCATGGCGGGCGGCCTCATGGCCACGTTGGGGCTGCCGCCTCTCCATCCCAGGACTGCGGGCGAACGGCGTTGCGGACGTTGCGTTCCGCAACGGCCTGGTCCGCATCTCCGGCCCCGCCACCAGCCCGATCGAGCTCGGCGCGCTGCTGACCATGCTCTTCCCCATCGCGCTCCACTGCGCGCTGCACCAGCGAGACATCGGCCGGTTCCGCCGGTGGTTTCCCGTCCTGACGGTCTTCGCAGCTCTTGCGCTCTCGGGCTCGCGTTCGGCGTACGTCGCCATCGCGATCGTCTTCGTCGTGCTGATGATCGGGTGGCCGAACAGGCTCCGCTGGACCGCAGGTCCCCTCGCGATCGTCGGCGCGATCCTCATGGGCCTGCTGCTGCCGCCGCTGTACCGGTCCGTTCGCAGCATGTTCGTCACGGCGCAGGACGACCCGAGCATCGCCTCCCGCACCGACAGCTACGCGCTGGCGAGTCAGTTCTTCGCGCGCTGGCCTGTGTTCGGTCGCGGGCTCGGCACCTTCCTGCCCAAGTACCGCATCTTCGACAACGAGTACCTCGGA
PROTEIN sequence
Length: 206
MTAWYTCATSTRSSGASAWRAASWPRWGCRLSIPGLRANGVADVAFRNGLVRISGPATSPIELGALLTMLFPIALHCALHQRDIGRFRRWFPVLTVFAALALSGSRSAYVAIAIVFVVLMIGWPNRLRWTAGPLAIVGAILMGLLLPPLYRSVRSMFVTAQDDPSIASRTDSYALASQFFARWPVFGRGLGTFLPKYRIFDNEYLG