ggKbase home page

SCNpilot_BF_INOC_scaffold_46799_3

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(1324..1542)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLG8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 72.0
  • Bit_score: 129
  • Evalue 1.30e-27
50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 72.0
  • Bit_score: 129
  • Evalue 3.70e-28
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 72.0
  • Bit_score: 129
  • Evalue 1.80e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 219
TTCCGGCAGCTGTGGATCACCCGCATCAACGCAGGCGCCCGCGCCAACGGCATGACCTACAACCGCTTCATCCAGGGCCTCAAGGCCGCGGGTGTCGAGGTCGACCGCAAGAACCTGTCGGAGCTCGCGATCAGCGACCCGGCGGCCTTCACCGCGCTCGTCGAGCTGGCCCGTGCCAACGTGCCCGCCCACGACACGCAGAAGGACACCGCCGCCTGA
PROTEIN sequence
Length: 73
FRQLWITRINAGARANGMTYNRFIQGLKAAGVEVDRKNLSELAISDPAAFTALVELARANVPAHDTQKDTAA*