ggKbase home page

SCNpilot_BF_INOC_scaffold_60958_2

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 674..1078

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Acidovorax sp. CF316 RepID=J1EIF2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 127.0
  • Bit_score: 141
  • Evalue 6.20e-31
Transcriptional regulator {ECO:0000313|EMBL:KGM56228.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daeje similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 129.0
  • Bit_score: 171
  • Evalue 1.00e-39
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 127.0
  • Bit_score: 139
  • Evalue 5.10e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
GTGCTCTACCTGCGCCGCGTCGGCGGCCAGTCGCAGTTTTCCAGCAGCCTCGCGGCGCAGGCCGGCGCCGGCGACGGGTTGCAATCGCTCGTCACCTGGATCGCCGGCAATCCCGAGGCCGACCTCAGCGTCGCCATGCTGGCCGACCGCGCCATCATGAGCGAACGCACCTTTGCCCGCAGCTTTCGCGCCCAGACCGGCATGACCCCGGCACGCTATGTCGAGCTGGTCCGCCTCGACCGGGCCAAGCAACTGCTGGAATCGACCCGCTGGCCATTGGCCCGCATCGCTGAGCGGGCGGGGCTGGGCAGCGCCTCCACTCTGTCGCGCGCCTTCCGCAGGCATCTGGGCACCACGCCCGAAGGCTACCGCGAACGCTTCCGCATCGAAGGCAGCCGGCGCTGA
PROTEIN sequence
Length: 135
VLYLRRVGGQSQFSSSLAAQAGAGDGLQSLVTWIAGNPEADLSVAMLADRAIMSERTFARSFRAQTGMTPARYVELVRLDRAKQLLESTRWPLARIAERAGLGSASTLSRAFRRHLGTTPEGYRERFRIEGSRR*