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SCNpilot_BF_INOC_scaffold_39_72

Organism: SCNpilot_BF_INOC_Kapabacteria_60_234

near complete RP 52 / 55 MC: 3 BSCG 47 / 51 ASCG 13 / 38
Location: 75350..75895

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=7718254 bin=BACIGN_2 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 376
  • Evalue 2.00e-101
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Caldithrix_44_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 186.0
  • Bit_score: 145
  • Evalue 6.20e-32
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 184.0
  • Bit_score: 131
  • Evalue 2.40e-28

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Taxonomy

RBG_13_Caldithrix_44_9_curated → Caldithrix → Bacteria

Sequences

DNA sequence
Length: 546
ATGCAGCTCGTACGGGGCGGCGACCATGCCGCCCTGCACGAGCTGTATCGCCGTCATTCCAGGCGTATTCTCTACTATCTCTCGACCATGCTTCGCAGGGACGAGGAACGGGCACGCGACCTGTTGCAGGACCTCTTCCTCCGCATCGTGGAGCGCCCGGATCTCTACGACGAAACGCGTCCCTTCGTCACCTGGCTGTTCTCATGCGCCTGGAATCTCTGCAAGAACGAATACCGCTGGAAGTCGCTGCGGAACGACGAAGCCATGGACGAGGAAGTTCATGGCTTCGAACCGCCGGACATCGAACATCGACTCGATATGAAGGAGTTCCGCAAGGTGCTCGACGACGAGCTGGCCACGTTGTCCGTCGAGCACCGTACCGTCTTCCACCTCCGATACGTCGAGGAGCTGTCGCTCCAGGACATCGCGGACGCCCTGGACATTCCACTCGGAACCGTCAAGTCACGGCTCTTCACCACACAGCGCCGCCTTGCCGACCGCCTCCATATGTACGACCCACGCCATCAACCGACGGATCTGCCATGA
PROTEIN sequence
Length: 182
MQLVRGGDHAALHELYRRHSRRILYYLSTMLRRDEERARDLLQDLFLRIVERPDLYDETRPFVTWLFSCAWNLCKNEYRWKSLRNDEAMDEEVHGFEPPDIEHRLDMKEFRKVLDDELATLSVEHRTVFHLRYVEELSLQDIADALDIPLGTVKSRLFTTQRRLADRLHMYDPRHQPTDLP*