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SCNpilot_BF_INOC_scaffold_39_133

Organism: SCNpilot_BF_INOC_Kapabacteria_60_234

near complete RP 52 / 55 MC: 3 BSCG 47 / 51 ASCG 13 / 38
Location: comp(139963..140433)

Top 3 Functional Annotations

Value Algorithm Source
transcription activator, effector binding domain-containing protein id=7718192 bin=BACIGN_2 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 322
  • Evalue 1.80e-85
Strain UM270 sctg_0286_0001, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ57061.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomon similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 155.0
  • Bit_score: 143
  • Evalue 2.00e-31
transcription activator, effector binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 155.0
  • Bit_score: 141
  • Evalue 1.60e-31

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGACTCCTTCGTTCGTCACCATCGAATCGTTCAAGGTCACAGGACCGAACGTCCGCACCGACCTCGCGACGGAACTGAATCCCGATACCGGGCGACTCAAACCCATGTGGACACGTTTCCTCGAAGAGAACGTCATGGCGACGATTCCGAACCAGGTGGACGGCTCCACGGTCTACGGCGTCTATTCCGACTATCAATCCGATCAGAACGGTCCGTACACGGCTACCGCCGGACTGCGGGTCAGCGCAGACGTCGGGAACGTTCCCGATCTCCACACCGTCGTCGTGAACGGTGGTGACTATCTCGTCTTCGAAGCCGAAGGACCGATACCCGATGTCGTCGGCAAGGTGTGGAGAGAGATATGGGCCTACTTCGAGAGCGGCGCCGATTACAGGCGCAGGTACTCGACGGACTTCGAACGCTATGCGAATACGGATTCCGTTGCGGTCTACATCTCCGTGGAACGCTGA
PROTEIN sequence
Length: 157
MTPSFVTIESFKVTGPNVRTDLATELNPDTGRLKPMWTRFLEENVMATIPNQVDGSTVYGVYSDYQSDQNGPYTATAGLRVSADVGNVPDLHTVVVNGGDYLVFEAEGPIPDVVGKVWREIWAYFESGADYRRRYSTDFERYANTDSVAVYISVER*