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SCNpilot_BF_INOC_scaffold_107_99

Organism: SCNpilot_BF_INOC_Flavobacterium_39_30

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 15 / 38 MC: 1
Location: 95983..96975

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 330.0
  • Bit_score: 636
  • Evalue 1.60e-179
rpoA; DNA-directed RNA polymerase alpha subunit RpoA (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 330.0
  • Bit_score: 628
  • Evalue 8.90e-178
  • rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XSJ4_FLAIG similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 330.0
  • Bit_score: 628
  • Evalue 3.10e-177

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Taxonomy

Flavobacterium suncheonense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 993
ATGGCAATATTTAATTTTCAAAAGCCCGATAAAGTTATCATGATCGATTCAACCGATTTTGAAGGTAAATTTGAATTTAGACCTTTAGAACCGGGATATGGATTGACTGTTGGTAACGCATTAAGACGTGTTTTGCTTTCTTCTTTAGAAGGATATGCAATCACTTCGGTTCGTATTGAAGGAGTGGATCACGAATTCTCTACAATATCAGGAGTGGTTGAAGATGTAACAGAAATTATATTGAATCTTAAACAAGTACGTTTCAAACGTCAGATCGAAGATATCGATAACGAATCTGTTTCTATCTCTTTTTCAGGTAAGGATCAATTGACAGCTGGAGATTTTCAAAAGTTTATCTCTGGTTTTCAGGTACTAAACCCGGATTTGGTTATCTGCAACCTTGATAGCAAAATTACCATAAACATGGAATTAACTATTGAGAAAGGTCGTGGTTACGTTCCTGCAGAAGAAAACAAAAAACAAAACGCACCTATAGGAACTATTTTTACAGATTCTATTTACACACCAGTAAAGAACGTAAAATATTCAATAGAAAATTTCCGTGTTGAGCAAAAAACTGACTACGAAAAATTAGTTTTTGAAATCATTACAGATGGTTCTATTCACCCTAAAGATGCATTAACAGAAGCAGCTAAAACGTTGATTCATCACTTTATGTTGTTCTCTGACGAAAGAATTACACTTGAGGCTGATGAAATTGCACAAACAGAGTCGTATGATGAAGAGTCATTACATATGAGACAATTGCTTAAAACTAAGCTTGTTGATATGGACTTATCTGTAAGAGCATTAAATTGTTTAAAAGCGGCTGAAGTTGATACACTTGGCGATTTAGTATCATTTAATAAAAATGATCTGATGAAGTTCCGTAATTTCGGTAAAAAATCATTAACAGAACTTGATGAATTAGTTGCTGTTAAAGGTCTTACTTTCGGGATGGATTTAACTAAATATAAATTAGATAAAGAATAA
PROTEIN sequence
Length: 331
MAIFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGYAITSVRIEGVDHEFSTISGVVEDVTEIILNLKQVRFKRQIEDIDNESVSISFSGKDQLTAGDFQKFISGFQVLNPDLVICNLDSKITINMELTIEKGRGYVPAEENKKQNAPIGTIFTDSIYTPVKNVKYSIENFRVEQKTDYEKLVFEIITDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEIAQTESYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFGKKSLTELDELVAVKGLTFGMDLTKYKLDKE*