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SCNpilot_BF_INOC_scaffold_370_41

Organism: SCNpilot_BF_INOC_Flavobacterium_39_30

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 15 / 38 MC: 1
Location: 38720..39286

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 factor n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SAZ4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 171.0
  • Bit_score: 315
  • Evalue 3.40e-83
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KGO90257.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 187.0
  • Bit_score: 334
  • Evalue 9.80e-89
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 181.0
  • Bit_score: 291
  • Evalue 1.90e-76

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Taxonomy

Flavobacterium suncheonense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
TTGGAAATAAATTCAGAGATAATTCAAAAAAACATTGAAAAGGCAAAATCCGGAGATCAGGTAGCCTTTACATTTTTGCTGGATTTTTTCTGGAATGAGATTTACGGCTTTATGCTGAAACGTACCGAAAACGAAACGGACACCGAAGATATTGCCATTGAAACGTTTGCAAAAGCTTTTGACAAAATAACTTCCTACAATCCGGAATTCGGATTCAATACCTGGCTGATTACCATTGCCAAGAACGTCCATATTGATATGCTGCGTAAAAAGAAATCGGCATTGTTTCTGGACATCAATGACGAAGAAAACCAACAGGCATACAATGTTATCGACTCCTCACCCACCATTGAAGACGAGATCATTAAAGAGCAAAACCTTGCCCGTTTATTACTGTACATCAAGGAATTAAAACCGGCCTACCAGGAAGTTATCCAGCTGCGTTATTTCCAGGAAATGAGTTATCAGGAAATTGCCGATCAGCTTGAAGAGCCGCTAAACAATGTAAAAATCAAACTGTTGCGTGCCAAAAAGCTTTTATTTGAAATTATTCAACAAAAAAGATAA
PROTEIN sequence
Length: 189
LEINSEIIQKNIEKAKSGDQVAFTFLLDFFWNEIYGFMLKRTENETDTEDIAIETFAKAFDKITSYNPEFGFNTWLITIAKNVHIDMLRKKKSALFLDINDEENQQAYNVIDSSPTIEDEIIKEQNLARLLLYIKELKPAYQEVIQLRYFQEMSYQEIADQLEEPLNNVKIKLLRAKKLLFEIIQQKR*