ggKbase home page

SCNpilot_BF_INOC_scaffold_1077_12

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(9681..10214)

Top 3 Functional Annotations

Value Algorithm Source
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] id=12493327 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 361
  • Evalue 5.00e-97
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 177.0
  • Bit_score: 319
  • Evalue 3.10e-84
def; peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 177.0
  • Bit_score: 292
  • Evalue 8.10e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGGCCATCCGCGAGGTCCTGAAAATGGGTGATCCGCGCCTGCTTGCCCAGGCGCGCCCGGTGGAGGATTTTTCCACGCCCGACCTGTCGCGGCTGATCGTCGACATGCACGACACCATGCGTTCGCTGAACGGGGCCGGCCTGGCAGCCCCGCAGATCGGCATTGGCCTGCAGGTGGTGATTTTTGAAGTCAGCGGCAACCCGCGTTATCCGGATGCCGAAACCGTGCCGTTCACTGTGCTCATCAATCCCGTGCTGACGCCCCTGTCCGACATCATGGAGGAAGGCTGGGAAGGCTGTCTGTCGGTGCCCGGCATGCGTGGACTGGTGCCGCGCCACGTTTCGTTGCGCTATCGGGGCTTCGATGCCGGGGGCGAACCGATCGATCGCAGCGTGAGCGATTTCCATGCCCGCGTGGTGCAGCACGAGGTCGACCATCTGCACGGCATCCTGTACCCGATGCGTATCCGCGATCTGCGCACGTTTGGCTTCACCGAGACCCTGTTTCCCGGGCAAACCCTGCAGGACGATTGA
PROTEIN sequence
Length: 178
MAIREVLKMGDPRLLAQARPVEDFSTPDLSRLIVDMHDTMRSLNGAGLAAPQIGIGLQVVIFEVSGNPRYPDAETVPFTVLINPVLTPLSDIMEEGWEGCLSVPGMRGLVPRHVSLRYRGFDAGGEPIDRSVSDFHARVVQHEVDHLHGILYPMRIRDLRTFGFTETLFPGQTLQDD*