ggKbase home page

SCNpilot_BF_INOC_scaffold_17460_5

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 3079..3354

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein id=12495519 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 193
  • Evalue 7.20e-47
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 70.0
  • Bit_score: 76
  • Evalue 4.70e-12
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AAY92008.2}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 70.0
  • Bit_score: 76
  • Evalue 2.40e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGATGCGCCATCTGGGACTCGCCGGCTTGTTGTGGTGGGCCGTCACGGCGCAGGCAAGCCCGACGTGGAACGGCCTGTGGCGTACCCCCGACCAGCGCGCGCAACAGCTCCTGCAGCAGGGCAAGGCGGCCGAAGCGTCACGGCTCTTTCAGGATCCGCGCCGCAAGGCGTATGCCGAGTTGCAGGCCGGCAATTTTTCGCAGGCGGCGCAGGATTTCCATGCGTTCAACGACACCGACGGCCAGTACAACCGCGGCAATGCCCTGGCGCGCGCG
PROTEIN sequence
Length: 92
MMRHLGLAGLLWWAVTAQASPTWNGLWRTPDQRAQQLLQQGKAAEASRLFQDPRRKAYAELQAGNFSQAAQDFHAFNDTDGQYNRGNALARA