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SCNpilot_BF_INOC_scaffold_1869_26

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(19823..20158)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S30P / sigma 54 modulation protein; K05808 putative sigma-54 modulation protein id=12495135 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 227
  • Evalue 5.50e-57
30S ribosomal protein S30 similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 111.0
  • Bit_score: 205
  • Evalue 1.10e-50
Possible Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:AAZ96485.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; T similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 111.0
  • Bit_score: 205
  • Evalue 5.30e-50

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGAATTTAACGATTTCTGGCCATCACCTGGAAGTTACCCCAGCCATCCGCGACTATGTCTCCGGGAAACTCGACCGCGTCAAACGCCATTTCGACCACGTCATCAAAGTCACGGTCATCATGCAGGTGGAGAAACTGGTACACAAGGTGGAAGCCACGCTGCATGTGAAGGGCCACGATTTCCATGCCCGCAGCGAAGACGGGAACATGTATGCCGCGATCGACCTGCTGGCGGACAAGCTGGATCGCCAGATCGTCCGACACAAGGAAAAATCCTCGGACGTCCATCAAGACGGCGGCGGGTTGAAGCATCGACCATCGGAAAGCCCCGCCTGA
PROTEIN sequence
Length: 112
MNLTISGHHLEVTPAIRDYVSGKLDRVKRHFDHVIKVTVIMQVEKLVHKVEATLHVKGHDFHARSEDGNMYAAIDLLADKLDRQIVRHKEKSSDVHQDGGGLKHRPSESPA*