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SCNpilot_BF_INOC_scaffold_1869_27

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(20314..21747)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 477.0
  • Bit_score: 854
  • Evalue 9.30e-245
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 478.0
  • Bit_score: 821
  • Evalue 1.00e-235
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus thioparus RepID=UPI0003749A25 similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 477.0
  • Bit_score: 876
  • Evalue 1.30e-251

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAAACACAGTCTTCAACTCAAACTCGGTCAACACCTCACACTGACCCCCCAACTGCAACAGTCGATCCGGCTGCTGCAGTTGTCGACGCTGGAACTGAACCAGGAACTCGAGCAAATGCTGCAGGACAATCCTCTGCTGGAGCGCGAGGAGGAAGACGAAGCCAGCCCCGCCGCGACGGAAACCCCGGCCCATACGGCCGAAGCCGAAATACAGGACACGGACACGGCACCCCCCGAACCTGGCGAGCCCGAGCCCAGCGCCACGCTGGATGATGCTGACTGGAACGACTACAGCGTGGCCAGCAGCGACGATGAAGACAACGATTACACCCAGGGCTCGATATCAGGCGCGACCCTGCGCGAACATCTGTTGAATCAGCTGATCGTCAGCCCCCTCACCCTGCGCGACCGCACGCTGGTCGCCGCGCTGATCGACGACCTGGACGATTCGGGTTTTCTGACCCAGCCGCTGGAAGACATTACCGCCAGCCTTCAGGGCGAACTCGAAGAACTTGAGCCCGAGGAGCTGGATATCGCGCTCAAGCACCTGCAGAACATGGACCCGACCGGGGTCGGCGCGCGCAATCTGGCCGAATGTCTGACCCTGCAGTTGCGCGCGCTGCCCCCGGACACCCCCGCGCGCGACGCCGCCATGCGGCTCACCACGCATTATCTGGATCTGCTCGCCGCACGCGATGTCGGCAAGCTGAAAAAAATGCTCGGCATCGACGACGCCATGCTGCGCGCCGCGCGCGCGCTGATCCTGTCCCTGAACCCGCGCCCGGGCGCCGCCTTCGGTGCCGATGACACGCACTATGTGATTCCCGACGTCTATGTGCGCAAGATCAAGGGCATGTGGATCGCCAGCCTCAATGCCGACGCCATGCCCAAGCTGCGCGTCAACCGCGTCTACGCCGACATCCTGTCGCGTCATCGTGAAAGCGGCGGCAACCAGCTCGCCAGCCAGTTGCAGGAAGCCCGCTGGCTGATCAAGAACGTGCAACAGCGTTTCGATACCATCCTGCGCGTCTCGCAGGCCATCGTCGACCGCCAGAAACAGTTTTTCGAACACGGCGAGGTGGCGATGCGTCCGCTGGTCCTGCGCGAGATCGCCGACGCGGTGGAACTGCACGAATCGACCATCTCGCGCGTCACCACGCAAAAATACATGATGACGCCACGCGGCCTGTACGAACTGAAGTACTTCTTCGGCAGCCACGTCTCCACCGACAGCGGGGGGGCCTGTTCCTCGACCGCCATCCGCGCCCTCATCAAACAGCTGGTCGCCGCCGAAAGCACCAAAAAGCCTTTGTCCGACGGCCAGTTGGCGGGCGTGCTGGGCCAGCAGGGGATCGTGGTGGCCCGTCGCACGGTCGCCAAATATCGCGAATCGTTGCAGATTCCGCCCGCCAACATGCGTCGCGCACTTTGA
PROTEIN sequence
Length: 478
MKHSLQLKLGQHLTLTPQLQQSIRLLQLSTLELNQELEQMLQDNPLLEREEEDEASPAATETPAHTAEAEIQDTDTAPPEPGEPEPSATLDDADWNDYSVASSDDEDNDYTQGSISGATLREHLLNQLIVSPLTLRDRTLVAALIDDLDDSGFLTQPLEDITASLQGELEELEPEELDIALKHLQNMDPTGVGARNLAECLTLQLRALPPDTPARDAAMRLTTHYLDLLAARDVGKLKKMLGIDDAMLRAARALILSLNPRPGAAFGADDTHYVIPDVYVRKIKGMWIASLNADAMPKLRVNRVYADILSRHRESGGNQLASQLQEARWLIKNVQQRFDTILRVSQAIVDRQKQFFEHGEVAMRPLVLREIADAVELHESTISRVTTQKYMMTPRGLYELKYFFGSHVSTDSGGACSSTAIRALIKQLVAAESTKKPLSDGQLAGVLGQQGIVVARRTVAKYRESLQIPPANMRRAL*