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SCNpilot_BF_INOC_scaffold_32775_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(3..161)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) id=12495384 bin=THIO_HI species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 53.0
  • Bit_score: 111
  • Evalue 2.10e-22
cold-shock DNA-binding protein family protein similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 53.0
  • Bit_score: 109
  • Evalue 2.90e-22
Possible Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AAZ96808.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 53.0
  • Bit_score: 109
  • Evalue 1.40e-21

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 159
ATGGCAACAGGTACTGTCAAGTGGTTCAGCGACGCCAAGGGTTTCGGATTCATCACCCCCGATGACGGCGGCGAGGATGTGTTCGCACATTTCTCCGCCATCCAGTCCAGCGGTTTCAAGACCCTGAAGGAAGGCCAGAAAGTCAGCTTCGAAGTCAGC
PROTEIN sequence
Length: 53
MATGTVKWFSDAKGFGFITPDDGGEDVFAHFSAIQSSGFKTLKEGQKVSFEVS